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SCNpilot_cont_500_bf_scaffold_3768_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2368..3777

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase {ECO:0000313|EMBL:CCP09593.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCP09593.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 472.0
  • Bit_score: 754
  • Evalue 9.90e-215
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 467.0
  • Bit_score: 752
  • Evalue 6.50e-215
  • rbh
ATP-dependent RNA helicase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIN4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 472.0
  • Bit_score: 754
  • Evalue 7.10e-215
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGTCGTTCGAAGATCTGGGCCTTGCGCCCTTCCTGCTGCGCGCGCTCGCCGAGCAGGGTTACGAAAACCCCACCCCGATCCAGCAGCAGGCCATCCCGCTGGTGCTGGAAGGCCACGACCTGCTGGCCGGCGCGCAGACCGGCACCGGCAAGACCGCCGCGTTCGGCCTGCCGCTGCTGCAGCACCTGGCCACCTCGGCGCAGGAAGTGCGCAACGGCCCGCGCCGGCCGCGCGCGCTGATCCTGACCCCCACCCGCGAACTGGCCACCCAGGTGCATGACAGCCTGCGCGGCTACAGCAAGTACCTGCGCATCCCCAGCACCTGCATCTACGGCGGCGTCGGCATGGGCAACCAGCTCGACATCCTGCGCCGTGGCGTGGACCTGCTGGTGGCCTGCCCGGGCCGCCTGATCGACCACCTGGAGCGCCGCAGCATCGACCTGTCCGGCATCGAGGTGCTGGTGCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTCCTGCCCTCGATCAAGCGCATCCTGGCCAAGCTGCCCAAGCAGAACCGGCAGACCCTGCTGTTCTCGGCCACCTTCGCCGACCCGATCAAGCAGCTGGCGCTGGAGTTCATGCGCAACCCGCGCGAGGTGATGGTGACCCCGCGCAACACCGTGGCCGAGACCATCGCCCACCGCGTGCACCCGGTCGACGCCGGGCGCAAGCGCGAACTGCTGCTGCACCTGCTGGCGCAGGACTCGCGCGAGCAGACCCTGGTGTTCGCCAAGACCAAGCACGGCAGCGACAAGCTGGCCACGTTCCTGGACAAGTCCGGCATCAAGACCGCGGCGATCCACGGCAACAAGAGCCAGAGCCAGCGCCTGCGCGCACTGGGCGACTTCAAGGCCGGCCGCGTCACCGTGCTGGTGGCCACCGACATCGCCGCGCGCGGCATCGACATCAACGAGCTGCCCAAGGTCATCAACTACGACCTGCCGATGGTGGCCGAGGATTACGTGCACCGCATCGGCCGCACCGGCCGCAACGGCGCCAGCGGCCAGGCGGTTTCGCTGGTGGCGCAGGAAGATGCCAAGTACCTGCGCCAGATCGTGCGCCTGCTGGACCGCGACATGGATATCCGCGACGTGCCGGGCTTCGAGCCGCACACGCCGATCCGCTGGGGCAACAGCGCCCCGGGCAAGGCCGAGCAGCCCGGCGGCGAACGTCCGCCGCGCCGCGGCAATGGCGGCCGCCCCGGCGGCCACCGCGATGCCGCGCCGGGCCAGCGCCGTGGCGGGGCGGGTGCGGCGTCCGGTGCCCCGCGTGGCGAGAACAACGGCCAGCGCCGCGAAGGCCAGCCGGCCGGCGCCGCGCGCCGCCGCCGTGGCGGCCGTGGCCGCGGCAAGGCGCCGCAGCCCAACAGCGCGGTCTGA
PROTEIN sequence
Length: 470
MSFEDLGLAPFLLRALAEQGYENPTPIQQQAIPLVLEGHDLLAGAQTGTGKTAAFGLPLLQHLATSAQEVRNGPRRPRALILTPTRELATQVHDSLRGYSKYLRIPSTCIYGGVGMGNQLDILRRGVDLLVACPGRLIDHLERRSIDLSGIEVLVLDEADRMLDMGFLPSIKRILAKLPKQNRQTLLFSATFADPIKQLALEFMRNPREVMVTPRNTVAETIAHRVHPVDAGRKRELLLHLLAQDSREQTLVFAKTKHGSDKLATFLDKSGIKTAAIHGNKSQSQRLRALGDFKAGRVTVLVATDIAARGIDINELPKVINYDLPMVAEDYVHRIGRTGRNGASGQAVSLVAQEDAKYLRQIVRLLDRDMDIRDVPGFEPHTPIRWGNSAPGKAEQPGGERPPRRGNGGRPGGHRDAAPGQRRGGAGAASGAPRGENNGQRREGQPAGAARRRRGGRGRGKAPQPNSAV*