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SCNpilot_cont_500_bf_scaffold_5379_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1315..2046)

Top 3 Functional Annotations

Value Algorithm Source
Histidine utilization repressor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQ78_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 242.0
  • Bit_score: 373
  • Evalue 2.30e-100
  • rbh
Histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 242.0
  • Bit_score: 373
  • Evalue 7.20e-101
  • rbh
HTH-type transcriptional repressor yvoA {ECO:0000313|EMBL:EZP45496.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 242.0
  • Bit_score: 373
  • Evalue 2.50e-100

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGAAGAACAGGAAGGCGCCGAGCCTCAACCAGCGCATCCGCGGCGATATCGAAGGCCGCATCCTCAGTGGCGAGTGGGCGCCGGGCTTCCGTATTCCCTACGAACACGAGCTGATGGCGCAGTACGGCTGTTCGCGGATGACGGTGAACAAGGTGCTCACCGCGCTGGCCGAGAGCGGCATGATCGAGCGCCGCCGCCGCGCCGGCTCCTTCGTCGCGCGGCAGCCGCCGCACCTGGAGCAGGTGGCACTGGAGATTCCCGACATCGCGCTGGCGGTGAACGAGCGTGGCCACCGCTACGGTTTCAGGCTGCTGGAGCGGCAGCTGCGCCGAGCCGACGCGGCGGCGCCGGAGGAGGCGCGGCTGGTCGGCGCGGGCGAGCTGCTGGCCATGCGCTGCCTGCACCTGGCCGACGACCGCCCGCTGGCGCTGGAGCGGCGCCTGATCAACCCCGAGGCCGTGCCGGAAACGCTGGCGGTGGATTTTTCCACCCACGCCCCCGGCAGCTGGCTGCTGCAGAACGTGTCGTGGACGCGCGGCCAGCACCGCATCAGCGCGGTGGCGGCGACCGCCGCCGAGGCCGCGTTGCTGGAGGTGCCGGTGGGCACCGCCTGCCTGGTGATCGACCGCCAGACCTGGCGCGGCGAGATGCCCATCACCTGGGTGCGGCAGAAATTCCTGGGCGATGCCTACGACCTGGTGGCGCGCTTCGCGCCCGGCAGCAAACTCTAG
PROTEIN sequence
Length: 244
VKNRKAPSLNQRIRGDIEGRILSGEWAPGFRIPYEHELMAQYGCSRMTVNKVLTALAESGMIERRRRAGSFVARQPPHLEQVALEIPDIALAVNERGHRYGFRLLERQLRRADAAAPEEARLVGAGELLAMRCLHLADDRPLALERRLINPEAVPETLAVDFSTHAPGSWLLQNVSWTRGQHRISAVAATAAEAALLEVPVGTACLVIDRQTWRGEMPITWVRQKFLGDAYDLVARFAPGSKL*