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SCNpilot_cont_500_bf_scaffold_6006_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4931..5257

Top 3 Functional Annotations

Value Algorithm Source
TonB dependent receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQL9_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 108.0
  • Bit_score: 94
  • Evalue 5.40e-17
TonB-denpendent receptor {ECO:0000313|EMBL:EYR67756.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 106.0
  • Bit_score: 124
  • Evalue 1.20e-25
TonB dependent receptor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 108.0
  • Bit_score: 94
  • Evalue 1.70e-17

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
GTGCCGCTGGGCGCACATGGCGAGCTGATGTTCTCGGCACGCCATTCCTATGGCGGCAGCGCGCGCTGCAACGCCGGTTCCCTGAGCCAGGGCAACTGCGGGCGCTATCCCGCGTTCACCATCGGCGAGGAACGCAACCGCACCGACCTGTACCTGCGCTGGCGCTCGCCGTCCACGCACTGGAGCGTGGCTGCCTACGCCAACAATGTCTTCGACAACCGCTACGTGAACGGGCTGTACACCTATGGCACCACGGTGGTCGGCACCACCGCTGCCGGCGTCAGCGAGCCGCGGTTCTACGGCATGGAACTGATGTACCGGTTCTGA
PROTEIN sequence
Length: 109
VPLGAHGELMFSARHSYGGSARCNAGSLSQGNCGRYPAFTIGEERNRTDLYLRWRSPSTHWSVAAYANNVFDNRYVNGLYTYGTTVVGTTAAGVSEPRFYGMELMYRF*