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SCNpilot_cont_500_bf_scaffold_6006_14

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(12640..13185)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E9CC75 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 196.0
  • Bit_score: 171
  • Evalue 9.90e-40
TonB-dependent receptor {ECO:0000313|EMBL:AHY58617.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 193.0
  • Bit_score: 179
  • Evalue 3.90e-42
putative TonB dependent receptor protein; K03832 periplasmic protein TonB similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 188.0
  • Bit_score: 166
  • Evalue 1.00e-38

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAGTGCCACCCATGCCCATGAACTGGACGCCGCCGCACAGAGCGGACAATCGCGCAACCATGCCGTCTCGCCCGTGTTGTGGATGGGACTGCTGCTGGCGATCCTGCTCGGCGTGTTCACCCTGATGCGGCGCCATGACGCGCCGGCACCGGCGCTGCCGGCCAGCGATCCGGTCACCCCCACCACGGTATCGCCCGCGACGGATGCGGCACCCCCGGCAACGGCACCCGCTCCCCTCCAGCGCAAGCCGGCGGTGGTGCGCGACCGCCAGGCGCGGCCGTTGGCGGACAATCCCGCCCCGGCCTACCCGCCGGCCGCGCTCCGCGCCGGGATCGAGGGCAGCGTCGTGGCCAGCCTGCAGGTCGACGCGCAGGGCAAGGTCACCGATGCCAGCATCGTGTCGCATGACGGCCAGCGCAGCCGCGACCTTGATCGCGCCGTGTTGGACACCCTGCGTGGCTGGCGCTTCGAGCCGGCACTGCGCGACGGCCGCGCGGTGGCGACCGTGGTCCGGGTGCCGGTGGATTTCCGCACCGGCCGCTGA
PROTEIN sequence
Length: 182
MSATHAHELDAAAQSGQSRNHAVSPVLWMGLLLAILLGVFTLMRRHDAPAPALPASDPVTPTTVSPATDAAPPATAPAPLQRKPAVVRDRQARPLADNPAPAYPPAALRAGIEGSVVASLQVDAQGKVTDASIVSHDGQRSRDLDRAVLDTLRGWRFEPALRDGRAVATVVRVPVDFRTGR*