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SCNpilot_cont_500_bf_scaffold_5706_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2219..2917

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 183.0
  • Bit_score: 204
  • Evalue 1.00e-49
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 180.0
  • Bit_score: 155
  • Evalue 2.90e-35
Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 183.0
  • Bit_score: 204
  • Evalue 1.40e-49

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGATCAGGCAGAGGTCCCGCACCTCCGGGGCCTGTGTTTTCTTGCAAGGGGCGGTGCACGGTTTCTGTGAACTGCGGCAGCTCGCAGCGGCACGGGCCGGCCCTACCATGGAGTTCGTCAGGTTTCACGGCAGCATTGGGGGACGCTTGGGTACCCAGATCACGCAACTCCTGCATCGCTGGCAGGGAGGCGACGCGCAGGCGCGGGAGCAGTTGTTCGAAGCCCTGTATTCGGACCTGATGCTGGTCGCCCGCAACCGCCTGTTCAACGATACCGGCGGCACCCTGCAGCCGGCGGCGCTGGTCAACGAATCGCTGCTGCGCCTGCTGGGTTCGGAAGTGGATTTCAAGGACCGCGCCCATTTCATCGCGGTGGCGGCGCTGAAGATGCGCTCGGTCCTGGTGGACCACCTGCGCGCGCGGGCCGCGGACAAGCGCGGCGGCAACCTCGTCCAGTTGACCCTGTCCCACGCCAGCGACGTTCCCGACGACGACGGCGATGCCTACGACGTGATGGCGCTGCACCAAGCACTGAGCCAGCTGGCCGAACTCGAGCCGCGCGCGGCGAGCATGGTCGAGCTGACCTATTTCGGCGGCATGAGCCGCGATGAGATCGCCATGGTGATGGGGGTTTCGGCACCCACCGTGGACCGCGACCTGCGTTTCGCCAGGGCCTGGCTCAACCGACAGCTGGCCTGA
PROTEIN sequence
Length: 233
MIRQRSRTSGACVFLQGAVHGFCELRQLAAARAGPTMEFVRFHGSIGGRLGTQITQLLHRWQGGDAQAREQLFEALYSDLMLVARNRLFNDTGGTLQPAALVNESLLRLLGSEVDFKDRAHFIAVAALKMRSVLVDHLRARAADKRGGNLVQLTLSHASDVPDDDGDAYDVMALHQALSQLAELEPRAASMVELTYFGGMSRDEIAMVMGVSAPTVDRDLRFARAWLNRQLA*