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SCNpilot_cont_500_bf_scaffold_8188_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(5255..6688)

Top 3 Functional Annotations

Value Algorithm Source
amino acid permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D8772D similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 475.0
  • Bit_score: 904
  • Evalue 3.30e-260
  • rbh
Amino acid permease {ECO:0000313|EMBL:AHY59185.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 475.0
  • Bit_score: 903
  • Evalue 1.80e-259
Amino acid transporters; K03294 basic amino acid/polyamine antiporter, APA family similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 475.0
  • Bit_score: 883
  • Evalue 4.20e-254
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGTTCAAGCAACTGTGGGCCACCAAACATCCGCATGCCGCCCATGAAGAGGCCAATGGCCTGAGCCTGCGCCGCACCCTGGGGCCCTGGGGCCTCACCGCACTGGGCATCGGCGCGGTCATCGGCGGCGGCATCTTCGTCATCACCGGGCAGGCCGCGGCCAACCACGCCGGCCCGGCAATCATGCTGTCCTTCGTGCTGGCGGCAGTGTGCTGCGCGTTCTGCGCGATGGCCTACGCCGAATTCGCCTCGATGGTGCCGGTCTCCGGCAGCGCCTACACCTACACCTACGCCACCTTCGGCGAGCTTTCGGCCTGGTTCATCGGCTGGATGCTGGTACTCGAGTACGGCGTCTCCGCCTCGGCGGTGGCGGTGAGCTGGACCGGCTACTTCCTCAGCCTGCTCAGCCATTTCGACATCTACCTGCCGGCGGCGCTGGTCAACGCGCCACTGGACGCCCAGCTGCGCCCGACCGGCGCCATCGCCAACATCCCCGCCGCCGTGCTGGTGCTGCTGCTGACCTGGCTGTGCTACGTGGGCATCAGCAAGTCCTCGGCGATGAACATGGCCATGGTCATCCTCAAGACCGGCCTGATCCTGCTGGTCATCATCGCTGGCTGGAAGTACGTGGACCCGGCCAACTGGACCCCGTTCATTCCCGCCAACGAAGGCCCGGGCAAGTACGGCTTCGATGGCGTGCTGCGTGGTGCGGCGATGGTGTTCTTCGCCTACATCGGCTTCGAAGCGGTCTCGGTAGCCGCCCAGGAATCGCACCGCCCGCAGCGCGACCTGCCGATCGGCATGCTGCTGTCGCTGGTGATCTGCACCGTGCTGTACATCGCCATGGCCGCGGTGATGACCGGCCTGGTCCCGTACAAGCTGCTGGGCACCGCCGAGCCGGTGGTGACCGCGGTCGCCGCGCATCCGCAGCTGGACTGGCTGCGCATCATCGTCGAGATCGGCGCCTTGATCGGCCTGTCCTCGGTGGTGCTGGTGATGGTGATCGGCCAGCCGCGCATCTTCATGATCATGGGCCGCGACGGCCTGCTGCCGCCGGTGTTCACCAGGATCCACCCCAAGTACCGCACGCCGCACATCAACACGGTGATCACCGGCATCGGCATCGCCCTGCTCGCCGCGCTGTTCCCGCTGGACATCCTCGGCGAACTGACCTCGATGGGCACCCTGATCGCCTTCGCCGCGGTCTGCGCCGGCGTGCTGGTCCTGCGCCGCACCCAGCCGGCCCTGCCGCGCCCGTTCCGCATCCCGATGGCCTGGTTGATCTGCAGCCTCGGCGTGCTCAGCTGCATCGCACTGCTGACCGCCATGACCCTGCACAACTGGATGCTGATGGGCCTGTGGACCGCCACCGGCTTCATCATCTACTTCGCCTACGGCATGCGCCACAGCAAGCTGGGCGGCCGCAACGGCTGA
PROTEIN sequence
Length: 478
MFKQLWATKHPHAAHEEANGLSLRRTLGPWGLTALGIGAVIGGGIFVITGQAAANHAGPAIMLSFVLAAVCCAFCAMAYAEFASMVPVSGSAYTYTYATFGELSAWFIGWMLVLEYGVSASAVAVSWTGYFLSLLSHFDIYLPAALVNAPLDAQLRPTGAIANIPAAVLVLLLTWLCYVGISKSSAMNMAMVILKTGLILLVIIAGWKYVDPANWTPFIPANEGPGKYGFDGVLRGAAMVFFAYIGFEAVSVAAQESHRPQRDLPIGMLLSLVICTVLYIAMAAVMTGLVPYKLLGTAEPVVTAVAAHPQLDWLRIIVEIGALIGLSSVVLVMVIGQPRIFMIMGRDGLLPPVFTRIHPKYRTPHINTVITGIGIALLAALFPLDILGELTSMGTLIAFAAVCAGVLVLRRTQPALPRPFRIPMAWLICSLGVLSCIALLTAMTLHNWMLMGLWTATGFIIYFAYGMRHSKLGGRNG*