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SCNpilot_cont_500_bf_scaffold_11765_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3323..3844

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 139.0
  • Bit_score: 273
  • Evalue 1.90e-70
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 139.0
  • Bit_score: 266
  • Evalue 6.80e-69
tRNA-dihydrouridine synthase A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030C1DB8 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 149.0
  • Bit_score: 269
  • Evalue 3.30e-69

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGGAGCCGATCCAACGTCCGGAAGAGTCCGTTTTGCAGCCGAACCACGACCCGCGCCATGCCGCCTCCCTGCGCCTGTCCGTCGCCCCGATGATGGACTGGACGGACACCCATTGCCGGGTGTTCCACCGCATCCTCGCGCCCGGTGCGCGGCTGTATACCGAGATGGTCCACGCCAATGCGGTGATCCACGGCGACCGCCAGCGGCTGCTCGGTTTCGACGCCAGCGAGCATCCGCTGGCACTGCAACTGGGCGGCAGTGACCCGGCGCTGCTGGCGCAGGCCGCGCGCATCGCCGCGGACTGGGGTTACGACGAGGTCAACCTCAATTGCGGCTGCCCGTCCGACCGGGTGCAGGCCGGGCGCTTCGGCGCCTGCCTGATGCGCGAGCCGGAACTGGTGGGCGAGTGCGTGGCGGCGATGGTCGCCGCGGTGGACATCCCGGTCACGGTGAAATGCCGGCTGGGCGTGGCAGGGGCTGTCGCCCAAGGAAAACCGCGAGGTCCCGCCACTGCGCTATGA
PROTEIN sequence
Length: 174
VEPIQRPEESVLQPNHDPRHAASLRLSVAPMMDWTDTHCRVFHRILAPGARLYTEMVHANAVIHGDRQRLLGFDASEHPLALQLGGSDPALLAQAARIAADWGYDEVNLNCGCPSDRVQAGRFGACLMREPELVGECVAAMVAAVDIPVTVKCRLGVAGAVAQGKPRGPATAL*