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SCNpilot_cont_500_bf_scaffold_11765_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3879..4262

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 127.0
  • Bit_score: 203
  • Evalue 2.30e-49
yjbN family TIM-barrel protein; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 127.0
  • Bit_score: 198
  • Evalue 1.70e-48
tRNA-dihydrouridine synthase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TVV4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 202
  • Evalue 2.80e-49

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
TTGCCGGTGGTGCTCAACGGTGGCCTGGCCACGGTCGAGGCGGCGCAGGCGCAGCTGGCGCATGTGGATGGAGTCATGCTGGGCCGGGCGGCCTACCACGACCCCTATGTCCTGCACCTGCTCGAAGCGGCGCAGACCGGCGCGCCGCTGCGCAGCCGCGAGGCGCTGCTGCAGCAGATGCGTCCCTATGTCGAGTCGCAACTGCAGGCAGGGCTGGCGCTCAAGCACATCACCCGCCACCTGCTCGGCCTGTACCACGGCCAGCCCGGTGGCCGCGGCTTCCGCAAGGTGCTCAGCGAGGGTGCGCACCTGCCCGGTGCCGACTGGGCGCTGGTCGAGCAGGCGGTGCAGGTCACCCGCGACCAGGCGGCACGCGCGGCCTGA
PROTEIN sequence
Length: 128
LPVVLNGGLATVEAAQAQLAHVDGVMLGRAAYHDPYVLHLLEAAQTGAPLRSREALLQQMRPYVESQLQAGLALKHITRHLLGLYHGQPGGRGFRKVLSEGAHLPGADWALVEQAVQVTRDQAARAA*