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SCNpilot_cont_500_bf_scaffold_13655_9

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 5830..6384

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037A9032 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 180.0
  • Bit_score: 187
  • Evalue 1.40e-44
NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97770.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 1.00e-53
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 187.0
  • Bit_score: 156
  • Evalue 6.20e-36

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCGCCCGCGCCATGCCCTGGCACTGCTGCTGGCCGCCTCCCTGGCGGCCTGCGGCGGGGGCCAGCCGCAGCCCGCCCCGATCAAGGTCGAGGGCCTGTCCAGCATCGAAGTGCGGTCCGCCGACGCCGGCGAAGGGCGCGGCTGGGATGGCGTGGTGGAGGCCGTGCGCCAGGCCACGCTGTCGGCGCAGACCAGCGGGCGGGTGGCGCAGGTGGAGGCCGATGTCGATGACCGGGTGGCTGCCGGGCAGGTGCTGTTGCGGCTGACCGCGGTCGAGCAGCAGGCGGGGGTGGACGCGGCGCGTGCGCAGGTGCGTGCCGCCGAGGCCGCCGCGCGCGAGGCCGAGCTCGACTATCGCCGCCATGCCGACCTGGCGCAGGGACAGTACGTGTCGCGGGCGCAGCTGGACCGCGCACGCGCCGCGCGCGACACCGCCGTGGCCGCGCGCGATGCGGCCCGGGCGCAACTGGCCAGCGCCGGCCAGCAGGGCAGCTACACCCTGGTGCGCGCACCCTATGCCGGCATCGTCAGCAGTCGCGACGTCGAGCCGGGC
PROTEIN sequence
Length: 185
MRPRHALALLLAASLAACGGGQPQPAPIKVEGLSSIEVRSADAGEGRGWDGVVEAVRQATLSAQTSGRVAQVEADVDDRVAAGQVLLRLTAVEQQAGVDAARAQVRAAEAAAREAELDYRRHADLAQGQYVSRAQLDRARAARDTAVAARDAARAQLASAGQQGSYTLVRAPYAGIVSSRDVEPG