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SCNpilot_cont_500_bf_scaffold_2823_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..739)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AA32B similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 220.0
  • Bit_score: 158
  • Evalue 6.90e-36
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CDO27856.1}; Flags: Precursor;; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 217.0
  • Bit_score: 139
  • Evalue 4.60e-30
spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 226.0
  • Bit_score: 131
  • Evalue 3.70e-28

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Taxonomy

Mycobacterium vulneris → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGAAATGCGAACGAAGCGTAAGTTGGCTACAGGCGCCGCGGTCGGGCTTGGCACACTGGTTCTTGCAACGATTGCGTCGGCGCAATCGCTTCCCGATCTGCATGGCAAGTCTTTTTCCTATGCTGGATGGGGCGGCGACACCCAGAAATACCAGGACGAAGTCTGGCTGAAGCCCTTCGCTGAAACGACAGGCGTCAAAATTGATCAGACGGATACCCCGACGGTTGCCGCATTGAAGACCCAGCAGGAAGCCAACAATGTTGGCATTGATGTCATGCAGATCGATTCCAGCATCGTCGATGCCGGATGCGGCACCATTTTCCAGGAAGCGAAGATTGATCGTTCTCAGCTCGATCCTGCGCTGGACAAAAACAAATGTGGCGTTCCGGTCGTGAAGTTTTCCTACGTCCTTGCGTATAACGCCAAGAAATTTGAAACCGCTCCGACCAGTGTCGCGGACTTCTTCGATGTCGAGAAATTTCCCGGCGTTCGCGCAGCGCGCGGCGGGATTAGCAACGTCGGCCTGATCGAAGGTGCGCTCCTCGCGGATGGTGTCGAACCAAGCAAAATCTATCCGATCGACCTCGATCGAGCGGTGAAAAAGCTCGAACGCATCAAGGACTCCATCGAAATCAAGGATTCCTTCGCCATATTGCAGGATGGATTGGCGAACGGCGAATTCGACATGGCGCTTATCCCGAATGGTCGCGCATTCAACGCGACAAAAGTCAATCCG
PROTEIN sequence
Length: 246
MEMRTKRKLATGAAVGLGTLVLATIASAQSLPDLHGKSFSYAGWGGDTQKYQDEVWLKPFAETTGVKIDQTDTPTVAALKTQQEANNVGIDVMQIDSSIVDAGCGTIFQEAKIDRSQLDPALDKNKCGVPVVKFSYVLAYNAKKFETAPTSVADFFDVEKFPGVRAARGGISNVGLIEGALLADGVEPSKIYPIDLDRAVKKLERIKDSIEIKDSFAILQDGLANGEFDMALIPNGRAFNATKVNP