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SCNpilot_cont_500_bf_scaffold_2823_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1425..1814)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Pseudomonas mendocina RepID=UPI0003799104 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 110.0
  • Bit_score: 140
  • Evalue 1.30e-30
spermidine/putrescine ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 110.0
  • Bit_score: 140
  • Evalue 4.20e-31
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 109.0
  • Bit_score: 140
  • Evalue 1.40e-30

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Taxonomy

R_Gammaproteobacteria_60_43 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGCCTGACAACGCCATGCACAATGCGGCGAGCGTAAATTTTATCGGCGTGTCAAAACGCTACGGGCACAATTTGACGGCGATTTCGTCGTTGAATCTTGAGATCAAGGCGGGAGAATTCCTGACGCTTCTCGGCCCGAGCGGATCGGGTAAGACGACGGCTCTCAATCTGCTCGCCGGCTTCCAGACGCCATCCTCAGGCTCGATATTGGTCGACGATCAGGATATCGGCCGCCTTCCGCCTCATAAGCGAAATATTGGCGTTGTTTTTCAGCACTACGCATTGTTTCCGCATATGACGGTGAGGCAGAATATTGCTTATCCGTTGAAGCAGCGCGGCGTTGGGTTGCCGTTGCTCGCGCTATTGTGTTTCGTCCAAGATTGCTTTTGA
PROTEIN sequence
Length: 130
MPDNAMHNAASVNFIGVSKRYGHNLTAISSLNLEIKAGEFLTLLGPSGSGKTTALNLLAGFQTPSSGSILVDDQDIGRLPPHKRNIGVVFQHYALFPHMTVRQNIAYPLKQRGVGLPLLALLCFVQDCF*