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SCNpilot_cont_500_bf_scaffold_3546_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3889..4359

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:EYR78436.1}; EC=3.6.3.31 {ECO:0000313|EMBL:EYR78436.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 155.0
  • Bit_score: 288
  • Evalue 5.10e-75
ABC transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PAE2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 156.0
  • Bit_score: 250
  • Evalue 8.50e-64
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 161.0
  • Bit_score: 228
  • Evalue 1.80e-57

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAACCAGGGCCGCGTCGAGCAGGTGAGCCCGCCGCACCAGCTCTATACCCGCCCGAACACGCCGTTCGTGGCGCAGTTCATCGGCCGCAACACGGTGCTGTCGGGCGAAGTTGCCGGCAGCGAGGGCGAGGACGTGGTGGTGACCACCGGGATCGGCACGCTTTCCGGCCGCGCCAACGGCGCGCTCGCCAGCAAAGGTCGCGTCAATCTCGTCGTGCCGGCAGAGGCCATCGAGGTGCATGCGGCGGGCGAAGGGGTGCTTGCAGGCGCGAAGAACCGCATCGACGCCCTCATCGAGCGCTCGGACGTCGTCGGCCATATCGCGCATCTGACGGCGCGGCTTCACGACGGTCGGGCGGTATCGCTGGAGGCCCATGTCGACAAATACCGCCCGGGCGCATTCCCGGCCGGCACGCCCGTGCTGCTGAGCTGGAACCCCGCCGAGGCGACGGTCATTCCGGCCGGTTGA
PROTEIN sequence
Length: 157
MNQGRVEQVSPPHQLYTRPNTPFVAQFIGRNTVLSGEVAGSEGEDVVVTTGIGTLSGRANGALASKGRVNLVVPAEAIEVHAAGEGVLAGAKNRIDALIERSDVVGHIAHLTARLHDGRAVSLEAHVDKYRPGAFPAGTPVLLSWNPAEATVIPAG*