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SCNpilot_cont_500_bf_scaffold_3723_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 5383..6555

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 360.0
  • Bit_score: 619
  • Evalue 2.40e-174
trpS; Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 355.0
  • Bit_score: 606
  • Evalue 6.20e-171
  • rbh
Tryptophan--tRNA ligase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D0L9_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 355.0
  • Bit_score: 606
  • Evalue 1.50e-170
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGGGCGAATGCGCGGCCGCCCGGGAGAATGTAAACCCCATCCTCCCGACCGGCGTCCGCGAGATCATTTTCCCTGGGGCCCTCCACCAGCCTATTGAGGACATCATGGCCGAATTCCAAAAACTCGTCTTTTCCGGCGTGCAGCCGACCGGCAACCTGCATCTCGGCAATTATCTCGGCGCGATCCGCAAGTTCGTGGCGCTGCAGAAGGACAATGACTGCATCTATTGCGTCGTCGACGAGCATGCCCTGACGGCGCAACTCGTCCACGAGGATCTGCGCGGCCAGACGCGCGCCATCGCCGCCGCCTATATCGCCTCCGGCATCGACCCGAAGAAGCATATCGTCTTCAACCAGTCGGCCGTCGCAGGCCATGCCGAGCTTGCCTGGATCTTCAATTGCGTCGCCCGCATCGGCTGGATGGAACGCATGACCCAGTTCAAGGACAAGGCCGGCGGCAAGAATGCCGAGCAGGTGTCGCTCGGTCTGCTGGCCTACCCCTCGCTGATGGCTGCCGACATCCTGCTCTATCGCGCCACGCATGTGCCCGTCGGCGACGACCAGAAGCAGCATCTCGAGCTGACCCGCGACATCGCTCAGAAGTTCAACATCGATTTCAGCGCCAATATCCGCAAGGAAGGCTACGGCATCGACATCAAGGTCGGCGACGAGCCGGTGCATGCCTATTTCCCGATGGTCGAGCCGCTGATCGACGGGCCGGCCCCGCGCGTCATGTCGCTCCGCGACGGCACCAAGAAAATGTCGAAGTCGGACCCCTCCGATCTCTCGCGCATCAACCTGATGGACGATGCCGAGACCATCTCGAAGAAGATCCGCAAGGCCAAGACCGATCCGGACGGCTTGCCGAGCGAGCCGGAAGGCCTGAAGGGCCGCCCGGAGGCCGACAATCTCGTCGGCATCTACGCGGCGCTGTCGGACAAGACGAAGGCGGATGTGCTCGCCGACTATGGCGGCCAGCAGTTCTCGGTGTTCAAGCCGGCGTTGATCGAACTCGCCGTCTCCGTGCTCGCGCCGATCACCGAGGAAATGCGCCGCCTGACCGGCGACACCAGCCATATCGACGCCATCCTGCGCGACGGCGGCGAGCGGGCCAATGCGCGGGCCGAAAAGACCATGAAGGAAGTGCGCGACATCATCGGCTTCCTGCGTTAA
PROTEIN sequence
Length: 391
MGECAAARENVNPILPTGVREIIFPGALHQPIEDIMAEFQKLVFSGVQPTGNLHLGNYLGAIRKFVALQKDNDCIYCVVDEHALTAQLVHEDLRGQTRAIAAAYIASGIDPKKHIVFNQSAVAGHAELAWIFNCVARIGWMERMTQFKDKAGGKNAEQVSLGLLAYPSLMAADILLYRATHVPVGDDQKQHLELTRDIAQKFNIDFSANIRKEGYGIDIKVGDEPVHAYFPMVEPLIDGPAPRVMSLRDGTKKMSKSDPSDLSRINLMDDAETISKKIRKAKTDPDGLPSEPEGLKGRPEADNLVGIYAALSDKTKADVLADYGGQQFSVFKPALIELAVSVLAPITEEMRRLTGDTSHIDAILRDGGERANARAEKTMKEVRDIIGFLR*