ggKbase home page

SCNpilot_cont_500_bf_scaffold_4021_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2763..4727)

Top 3 Functional Annotations

Value Algorithm Source
nocP2; nopaline ABC transporter nucleotide-binding protein/ATPase (EC:3.6.3.21) similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 646.0
  • Bit_score: 961
  • Evalue 9.80e-278
  • rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B419A similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 655.0
  • Bit_score: 1018
  • Evalue 2.80e-294
  • rbh
ABC-type histidine transport system ATPase component {ECO:0000313|EMBL:EYR79373.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 654.0
  • Bit_score: 1165
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1965
ATGTCCCCTTCGACGCCGTCCGGGCTTTTCGCCGGTGACTTTTCCGCGCTCCGTGCCCGCTTCCTGGCCGCCGCGCGGCAGGCGGGCGCCGATCTCGTCGAATACCTGCATCCGCTGCACGGACCGAACGGCGAGCGCCTGGCGACCGACGTCGCCTATCTCGGCCGCAACGATGCGAAAAAACTGCTGGTGCTGGTCTCGGGCACGCATGGGGTCGAAGGCCCCTTCGGCTCGGCCTGCCAGACCGCCTGGCTGTCGCAGAATTCGCCCTGGCAGCTTGCCGACGACACCGCCGTGCTGGTCATCCACCTCATCAATCCCTGGGGCACGGCCTGGCAACGCCGGGTCAACGAGGACAATGTCGACCTCAACCGCAATTTCATCGACTGGCAGAAGGGCGCGCCGAAAAACGAGCGCTATGCCGCCCTTCACGACGCGCTGGTCTGCCACGCCTGGGAAGGCCCGGAACGCGACCGGGCGCAGGAGGCCTTCGAGGCCGCCAAGCGGCAGCATGGCGGCTATGCCGGCCTCGCCCCGATCATCGAGGCCGGGCAATACGATTTCCCGGACGGCCTCTTCTATGGCGGCGACGGCCCCGTCTGGTCCAACCGCACGCTCAACGAGATTCTCTCGACCTTCGCGCAGCAGGCCCAACAGGTCGTCGTCTTCGACCTGCATACCGGCGCCGGCCCCTATGGCTATCCCGCGCTGCTCTCGGTCGCCGAAAACGAGCATGCCGGGCTCGACTGGGGGCGGCAGATTTTCGGCCCGGCGCTCTCCGTCGTCGTGACCGGCACGAATGCGACGACCGGCACCGGCATCGCCGCGACGGCGACCGGCTATGTCTCGGCCGCCGTTCGCCATGCCCTGCCGCAGGCGCGCGTCCTGCCGCTGGTCGTCGAATGCGGCACGCTGGACGGCGCCACGGTTTCCGACGCGGTGCAGGCCGACAACTGGCTGCACCTGTTCGGCAAGGTCGACTCGCCGCTGGGTGCGAAGATCAAGCAGACATTGCGCGCCGCCTTCATCCCCGAGGATGCCGACTGGCGGGGCACCTGCCTTGCGACGGCGCTGCGCCATTTCGACCGCGCCTTTGCCGACCTGAAGGCAGTCGGCGGCGCCGGCGAAGAAAAGCCCCTGCCCGCTGCCGCCGCCGTCTCGGTCGTGCCGCATCCGGAAGCAACGACCCCACGCGCCGGCGGGCGCCCGGCGCTGGAGGTGCAGGACATCCACAAGCGGTTCGGCTCGCTCTCGGTGCTCAACGGCGTCAGCCTGACGGCCCAGCCGGGCGAGGTCGTGTCGATGATCGGCTCCTCCGGCTCCGGCAAGAGCACCTTCCTGCGCTGCCTCAACCTGCTGGAACAGCCGAACGACGGGCGCATCGTCATCGACGGCGAGGAAATCCGCATGAAGAAGGCGGCGGACGGCAGCGCCGCCCCGGCCGACATGCGCCAGGTCGAGCGCATCCGCTCGCGCGTCGGCATGGTGTTCCAGAACTTCAACCTCTGGCCGCACATGACCGTGCTCGAAAACATCGTCGAAGCGCCGCTGCATGTGCTGAAGGAGAGCAAGCAGGAGGCCGTCGACCACGCGCATGCGCTTTTGAAGAAGGTGGGCCTCTCGGAAAAACATGCGCAATATCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGCCGCCATCGCCCGCACGCTCGCCATGCGCCCGAAACTCATCCTGCTGGACGAACCGACCTCGGCGCTCGATCCCGAGCTGGTCGGCGAAGTCCTGCGGGTCATCCGGCAACTGGCCGAAGAAGGCAATACGATGATCCTCGTGACGCATGAAATGCAGTTCGCGCGCGAGGTCTCACACAAGATTCTCTTCCTCCACCAGGGAAAGGTCGAGGAAGAGGGTGCGCCGGCGGAGATATTCACCAATCCGCGCTCCGAACGCATGCGCCAGTTCCTGGCCCGTACGCTCTGA
PROTEIN sequence
Length: 655
MSPSTPSGLFAGDFSALRARFLAAARQAGADLVEYLHPLHGPNGERLATDVAYLGRNDAKKLLVLVSGTHGVEGPFGSACQTAWLSQNSPWQLADDTAVLVIHLINPWGTAWQRRVNEDNVDLNRNFIDWQKGAPKNERYAALHDALVCHAWEGPERDRAQEAFEAAKRQHGGYAGLAPIIEAGQYDFPDGLFYGGDGPVWSNRTLNEILSTFAQQAQQVVVFDLHTGAGPYGYPALLSVAENEHAGLDWGRQIFGPALSVVVTGTNATTGTGIAATATGYVSAAVRHALPQARVLPLVVECGTLDGATVSDAVQADNWLHLFGKVDSPLGAKIKQTLRAAFIPEDADWRGTCLATALRHFDRAFADLKAVGGAGEEKPLPAAAAVSVVPHPEATTPRAGGRPALEVQDIHKRFGSLSVLNGVSLTAQPGEVVSMIGSSGSGKSTFLRCLNLLEQPNDGRIVIDGEEIRMKKAADGSAAPADMRQVERIRSRVGMVFQNFNLWPHMTVLENIVEAPLHVLKESKQEAVDHAHALLKKVGLSEKHAQYPGQLSGGQQQRAAIARTLAMRPKLILLDEPTSALDPELVGEVLRVIRQLAEEGNTMILVTHEMQFAREVSHKILFLHQGKVEEEGAPAEIFTNPRSERMRQFLARTL*