ggKbase home page

SCNpilot_cont_500_bf_scaffold_4314_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3243..4799

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I7D9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 519.0
  • Bit_score: 835
  • Evalue 3.50e-239
  • rbh
Putative TRAP transporter large permease protein HI0050 {ECO:0000313|EMBL:CDM59263.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 520.0
  • Bit_score: 837
  • Evalue 9.80e-240
TRAP family transmembrane transporter protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 508.0
  • Bit_score: 826
  • Evalue 3.90e-237
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
TTGTTCAGTTACGGTATCATGCCGCCGCTGATGTTCCTGGGGCTGATCGTTTTCATGCTCTATGGATTTCCGGTGGCCTTTTCGCTGGCCTCGGTCGGCCTGTTCTTCGGCATCGTCGGAATTGTCACCGGGCACTTCGACCCGGTCTTCCTGCTGGCGCTGCCGCATCGCTTCTTCGGCATCGTCTCCAACGACCTCTTGCTCGCCATTCCCTTCTTCACTTTCATGGGCGCCATCCTGGAGCGCTGCGGGCTGGCGGAGGATCTGCTGGAAGGCACGGGCAAGCTGTTCGGAGCGATCCCCGGCGGCCTCGCTTACGCCGTCATCGTCGTCGGCGCCATCCTCGGGGCGATCACCGGCACGGTCGCCGCCTCGGTGATCACCATGGGCGTCATCTCGCTGCCGATCATGCTGCGCTATGGCTACAACAAACGGCTGGCGACCGGCGTGATCGCCGCATCCGGCACGATCACCCAGCTCATCCCGCCCTCGCTGGTGCTGGTGGTGCTGGCCGACCAGCTCGGCCGCCCGGTCGGCGACATGTATCTCGGCGCCATCGGCCCGTCGATCCTGCAGGTGGCGATCTTCATCCTGTTCATCATGGTGCTGTCGGTGGTGCGCCCCAACGACATGCCGCCGCTGCCGCTGGAGGTGCGCGGCAAGCTGGATGGCAAGCTGCTGTTCAAGGTGCTGGCCGGCATGGTCCCTTCGATCGTGCTGATCTTCCTCGTGCTCGGCACCATCTTCATGGGGCTGGCGACGCCGACGGAAGCCGGCGCGCTCGGCGTCGTCGGCGCGATAGTGCTCGCCGCCCTGCATCGCCGTCTCACCTGGCCGCTCATCCGCCAGGGCATGAGCTCGACCATGCACATCACGTCGATGGTGGTGTTCATCCTCATCGGCTCCACCTGCTTCTCGCTGGTCTTCCAGGGCATGGACGGCTCGCGCTGGATCGAGCACCTGCTGACGGGGCTGCCGGGCGGACCGGTCGGTTTCCTGATCTTCGTCAACATCTTCATTTTCGTGCTCGCCTTCTTCCTCGATTTCTTCGAGATCGCCTTCATCGTTATCCCGATGCTGGCGCCGGTGGCGCAATCGCTGGGCATCGACCTCATCTGGTTCGGCGTGCTGATCTGCATCAACATGCAGACCAGTTTCATGCATCCGCCCTTCGGCTTCGCGCTGTTCTACCTGCGCTCCATCGCTCCGCGCGAGGTCAAGACCACCGACATCTATATGGGCGCCTTGCCCTGGCTCGCCATGCAGCTCATCCTCGTGGCGGTGGTGATCTTCTGGCCGGAATCAGTAACGCATTGGCTCGACAATGGTCCGAAGGTCGATCCGAGCACCATCAACATCGTCGTGCCCGGCTTCGGTGAGAACGGCGGCGGCGCGCAGATGCCGAATTTCGGCCTGCCGCCGCTCGGCGGCGACGGCAAGGGCGGCTTGCCGGGCCTCGGGAGCCGGCCTGCCGAAGGCGTGCCCGGCCAGCAGCCGGCCACGGCGCAACCGGCCAAGCCGGCTGTCGACCTCAGCCAGCCACCGGTCATCCAATGA
PROTEIN sequence
Length: 519
LFSYGIMPPLMFLGLIVFMLYGFPVAFSLASVGLFFGIVGIVTGHFDPVFLLALPHRFFGIVSNDLLLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIVVGAILGAITGTVAASVITMGVISLPIMLRYGYNKRLATGVIAASGTITQLIPPSLVLVVLADQLGRPVGDMYLGAIGPSILQVAIFILFIMVLSVVRPNDMPPLPLEVRGKLDGKLLFKVLAGMVPSIVLIFLVLGTIFMGLATPTEAGALGVVGAIVLAALHRRLTWPLIRQGMSSTMHITSMVVFILIGSTCFSLVFQGMDGSRWIEHLLTGLPGGPVGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVAQSLGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPREVKTTDIYMGALPWLAMQLILVAVVIFWPESVTHWLDNGPKVDPSTINIVVPGFGENGGGAQMPNFGLPPLGGDGKGGLPGLGSRPAEGVPGQQPATAQPAKPAVDLSQPPVIQ*