ggKbase home page

SCNpilot_cont_500_bf_scaffold_4326_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(9814..10881)

Top 3 Functional Annotations

Value Algorithm Source
Porin outer membrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTV7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 357.0
  • Bit_score: 441
  • Evalue 1.00e-120
porin outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 357.0
  • Bit_score: 441
  • Evalue 3.10e-121
Porin outer membrane protein {ECO:0000313|EMBL:AGB74131.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 357.0
  • Bit_score: 441
  • Evalue 1.40e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGAACATCAAGAGCCTTCTTCTCGGCTCCGCTGCAGCCCTCGCTGTAGTTTCCGGTGCCCAGGCTGCCGACGCCATCGTTGCTGCCGAGCCTGAGCCGATGGAATATGTCCGCGTTTGCGACGCTTACGGCACTGGCTATTTCTACATTCCCGGCACCGAAACCTGCTTGAAGGTCGGCGGTCGCGTTCGCTTCGACGTTCAGGCTGCAAACTCCTACGTCGCCAACAGCGACCTCGGCTGGCGCACCAAGTCGCGCGCTGAAATCTACCTCGACTCGGCCAGCGACACCGAATACGGCCCGCTGAAGACGCAGATCGTCACCCGCTTCGACTTTGACGGCACCTACAACGACGGCGTTCACACCACGACTTCGCTGATCGCTGCCAACATTCAGCTCGCTGGCTTCACCGTCGGTCTCGCTGACTCGGCTTACACCGTCTTCACGAACTACGCTGGCGACATCATCAACGACGACGTCATCTCCTACGGTGGCTTCGAAGTTAACCAGATCACCTACAACTACGATGGCGGCAATGGCTTCAAGGCTGTCGTCTCGGTTGAAGACGCTCGCCTCGCTCGCAACGGCACCGACGTCTGGGGCAATGCCCGTTACGTTGATGACGACAACTACAAGGTCAACGTTGTCGGCGGTCTCGGCTACTCCACCGGCGCATTCGGCTTCTCGGTCGTCGGCGGTTACGACAGCCATGCTGAAGAAGGCGCGATCAAGGCTCGCTTGGACGGCACCTTCGGCAACATCACTGCCTTCTTGATGGGCGCATGGAGCACCGACGGCGACACCACCAACGCCTTCGCACCGGGCGACACCTACGGTCCGTGGGGCGACTGGGCTGTCTGGGGCGGCATCGGCGGCAAGTTCTCCGACACGCTCGGCGCCAACCTGCAGCTCGCTTACACCGACAACGAAACCTTCGCTGCTGCTGCTAACCTGAAGTGGAACCCGGTACCGGGCCTGCTGATCCAGCCGGAAGTCACCTACACCAAGTGGGATTCGATCGACGAAGATCAGTGGAACGGCATGGTTCGCTTCCAGCGCACGTTCTAA
PROTEIN sequence
Length: 356
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPMEYVRVCDAYGTGYFYIPGTETCLKVGGRVRFDVQAANSYVANSDLGWRTKSRAEIYLDSASDTEYGPLKTQIVTRFDFDGTYNDGVHTTTSLIAANIQLAGFTVGLADSAYTVFTNYAGDIINDDVISYGGFEVNQITYNYDGGNGFKAVVSVEDARLARNGTDVWGNARYVDDDNYKVNVVGGLGYSTGAFGFSVVGGYDSHAEEGAIKARLDGTFGNITAFLMGAWSTDGDTTNAFAPGDTYGPWGDWAVWGGIGGKFSDTLGANLQLAYTDNETFAAAANLKWNPVPGLLIQPEVTYTKWDSIDEDQWNGMVRFQRTF*