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SCNpilot_cont_500_bf_scaffold_4245_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(6375..7229)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 285.0
  • Bit_score: 426
  • Evalue 2.20e-116
Shikimate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFH6_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 285.0
  • Bit_score: 426
  • Evalue 1.60e-116
aroE; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 285.0
  • Bit_score: 426
  • Evalue 4.90e-117

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGTTGATTCACGTGAAACAAGACGCGCCTTCGTCTGCGGCCATCCGATCAGGCATTCACGCTCGCCGCTGATACACGGCCATTGGCTGGAGCAGTTCGGCATCGCGGGGCGCTATACGGCCGAGGATGTCGCACCGGAAAACTTTGCCGGCTTCATCGAAGGCCTGCGCTCCGGCGAAGCCGGCTTCGTCGGCGGCAATGTCACCATTCCGCACAAGGAAGCCGCCTGCCGATTGGTGGATACGCCGGATGAACTGGCGAAGGAACTCGGCGCCGCCAACACGCTCTGGGTCGAGGACGGCAAGGTGCGGGCGACCAATACCGATGGCTACGGTTTCACCGCCAATCTCGATGCCTGCCATCCCGGCTGGGACAAGGGCTTGCGTGCGGTGATCTTTGGGGTAGGTGGTGCTGCGCGCGCCATCGTCCAGGCAGTGCGCGATCGTGGTTTTTCGGAAGTGCATATCGTCAACCGCACCGTCGCGCGGGCGCAGGAACTGGCGGACCGGTTCGGCCCGAAAATTTTCGCGCATCCGCAAGGCGCGCTCGGCGAGGTGATGCGCGGCGCCGATCTCTTCGTCAACACCACCTCGGTTGGCATGGATGGCGAGAATGCCATCGACCTCGATTTTGCGCCGCTGGTATCCGGTGCGGTCGTCACCGATATCGTCTATGTGCCGTTGATGACGCCGATGCTGATCAAGGCGCAGGCGCAAGGCTTTGCGATTGTCGATGGGCTCGGTATGTTGCTGCATCAGGCGGTGCCCGGTTTTGAAAAATGGTTTGGCCGGCGGCCGGCCGTCGATGAGGCGCTACGGGCATTGATCGTCGCCGATATGGAGCGCCATGCATGA
PROTEIN sequence
Length: 285
MVDSRETRRAFVCGHPIRHSRSPLIHGHWLEQFGIAGRYTAEDVAPENFAGFIEGLRSGEAGFVGGNVTIPHKEAACRLVDTPDELAKELGAANTLWVEDGKVRATNTDGYGFTANLDACHPGWDKGLRAVIFGVGGAARAIVQAVRDRGFSEVHIVNRTVARAQELADRFGPKIFAHPQGALGEVMRGADLFVNTTSVGMDGENAIDLDFAPLVSGAVVTDIVYVPLMTPMLIKAQAQGFAIVDGLGMLLHQAVPGFEKWFGRRPAVDEALRALIVADMERHA*