ggKbase home page

SCNpilot_cont_500_bf_scaffold_4259_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2..292

Top 3 Functional Annotations

Value Algorithm Source
PAS sensor protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000361C4E3 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 88.0
  • Bit_score: 116
  • Evalue 1.20e-23
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL48963.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 89.0
  • Bit_score: 116
  • Evalue 2.20e-23
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 92.0
  • Bit_score: 112
  • Evalue 9.10e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
GTGGCGCCGCCCAATTGCGCCGCCCGCATCGGCGGCGACGAATTCGCCATCCTGATGCCGGGCAGCGGCCGCGCCGATGTCGAGGCTATGATCGAGAATATCCATCGGCTGATGGCGATGAACAACCAGTATTACTCCAACCTGCCGCTCAGCATCGCACTTGGCGCCGCGACCAGCGAGCCTGGCGAGACGATGGAAGCCGTGGTCCGCCGTGCCGATCTCACTATGTACGCGGAAAAGGAAAAGCACTATGCGGTGCAGCAGGCGCGAGCGGCCGCCCGCCGCGCCTGA
PROTEIN sequence
Length: 97
VAPPNCAARIGGDEFAILMPGSGRADVEAMIENIHRLMAMNNQYYSNLPLSIALGAATSEPGETMEAVVRRADLTMYAEKEKHYAVQQARAAARRA*