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SCNpilot_cont_500_bf_scaffold_5852_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3..644

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D83EA similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 210.0
  • Bit_score: 222
  • Evalue 5.70e-55
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJC64024.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 210.0
  • Bit_score: 219
  • Evalue 4.00e-54
AraC type helix-turn-helix-domain containing protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 208.0
  • Bit_score: 201
  • Evalue 3.30e-49

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
AGCGGTGTCGTGCATGGCTTCGAGGTCGATCCGGCAAGCTCGGATGCCATCGTCGTCTCCATCGCCGACGATGCGCTGATGGCGATTAGGGCGCAGACCATCCTGCCGCTCGACAGGCCGCTGTTTCTCGCAGAGCCTGCCGAAAACCCGCATTGGGCCGGCATCGACGCCATCCTGCGCCGCCTCGAAAGCGAATACCACCAGGGCCGGTTCGGCATGGAAAAGGTGCTGGCCGCGCTCACCGGCGTGGTGCTGACCGATATCGCCAGGCTTGCCCATGACGGACCGGCGGAAGCGGCCGAGGCCGGGCCGCTGGCGCTGGCGCGGCGGTTTCGCACCCTGGTCGACCGGCATTTTCGCGACAACTGGCGGATGGAGCGTTACGTCGAGACGCTGGCCACGACGCCGCATCTGCTGGCGCGCGCCTGCCACGAGGCCTTCGGTCTCGCGCCCAAGGAATTCGTCAGCGAACGGCGGATGCTGGAGGCCAAGCGGCTGCTGCTGTTCACCGTCCGCTCGGTGGAAGACATCGCCTATGAGCTGGGGCTGAAGGACGCGGCCTATTTTTCCCGCGTCTTCAAGGCCTCCGAAAACCTGCCTCCCGGCCTGTGGCGGGCGGCTCAGACCGCCAAGCGGCTATAA
PROTEIN sequence
Length: 214
SGVVHGFEVDPASSDAIVVSIADDALMAIRAQTILPLDRPLFLAEPAENPHWAGIDAILRRLESEYHQGRFGMEKVLAALTGVVLTDIARLAHDGPAEAAEAGPLALARRFRTLVDRHFRDNWRMERYVETLATTPHLLARACHEAFGLAPKEFVSERRMLEAKRLLLFTVRSVEDIAYELGLKDAAYFSRVFKASENLPPGLWRAAQTAKRL*