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SCNpilot_cont_500_bf_scaffold_5432_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2347..2649)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=10 Tax=Rhizobium/Agrobacterium group RepID=RL28_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 2.90e-41
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 9.10e-42
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 4.10e-41

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Taxonomy

Agrobacterium sp. ATCC 31749 → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGTCGCGTGTATGCGAATTGACGGGCAAGGGCGTCCAGGTTGGCAACAACGTCAGCCACGCCAACAACAAGACCAAGCGCCGCTTCCTTCCGAATCTGTGCAACGTGACGCTGATCTCCGACGCTCTCGGCCAGCGTTTCCGTCTGCGCGTTTCGGCTGCTGCCCTGCGCTCGGTCGAACATCGCGGCGGCCTCGACGCTTTCCTGCTGAAGGCCCACGAGAACGAACTGAGCATGCGCGTCCGTCTGCTGCGCCGCCGGATCGCCAAGAAGTCGGCCGAAGCCGCTGCTGCCGCTGCCTGA
PROTEIN sequence
Length: 101
MSRVCELTGKGVQVGNNVSHANNKTKRRFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGLDAFLLKAHENELSMRVRLLRRRIAKKSAEAAAAAA*