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SCNpilot_cont_500_bf_scaffold_6302_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(6589..7101)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF5B2D related cluster n=1 Tax=unknown RepID=UPI0003CF5B2D similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 116
  • Evalue 2.70e-23
nocMc; nopaline ABC transporter permease; K10019 octopine/nopaline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 169.0
  • Bit_score: 111
  • Evalue 2.70e-22
Nopaline ABC transporter, permease protein {ECO:0000313|EMBL:ACE94943.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 169.0
  • Bit_score: 111
  • Evalue 1.20e-21

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGACATGGATCTTCTGCTCACCGGCATCGTCACGCCCGCCAGCGGCATACCGCTCACTCCACTCCTGGCGGGTGCATCACTCGCTCTGGGCTTTACGCTCGCCGTGCCGCTCGGCTTCATGCGCGCGTCTGGCAAAAAATGGCTATCGCTGCCGATACTCGTCTATACCTATGTGTTTCGCGGCACTCCACTGCTGGTCCAACTCTTCATCATCTATTACGGCCTAAGGCCAGATCGGCGCCATCCGGTCGAGCGTGCTCTGGGTCCTGCTTCGCGATCCCTTCTGGTGCTGCCTGATTGCCTTTTCGCTGAACGGTGCGGCCTATGCGACGGAGATCTTCCGTGGCAGAATCCAGGGTATGCGAGCGGGATGGTCGAGACGGCCGACGCCATCGGCATGTCGCCGCTGCAGGTCAAGCGGGACATCATATTTCCCATCGCCTTCAAAAGCGTGCTCCCCTCCTGCGCCAACGAAGTCATTAGTCCGGGATATCCTTACCCGCATCGCTAA
PROTEIN sequence
Length: 171
MDMDLLLTGIVTPASGIPLTPLLAGASLALGFTLAVPLGFMRASGKKWLSLPILVYTYVFRGTPLLVQLFIIYYGLRPDRRHPVERALGPASRSLLVLPDCLFAERCGLCDGDLPWQNPGYASGMVETADAIGMSPLQVKRDIIFPIAFKSVLPSCANEVISPGYPYPHR*