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SCNpilot_cont_500_bf_scaffold_6876_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(8121..9737)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1); K00119 [EC:1.1.99.-] similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 534.0
  • Bit_score: 562
  • Evalue 1.90e-157
Choline dehydrogenase {ECO:0000313|EMBL:ADU37990.1}; EC=1.1.99.1 {ECO:0000313|EMBL:ADU37990.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 534.0
  • Bit_score: 562
  • Evalue 8.30e-157
Choline dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1Y7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 534.0
  • Bit_score: 562
  • Evalue 5.90e-157

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGAGTGTGGTATCGGCAGGACAGTTTGACTATATCGTCATCGGAGCAGGCTCTGCCGGGGCCGTCCTGGCCAATCGGCTCTCCGAGGATGCGGGGACGAAAATCCTCGTGCTGGAGGCGGGGCCCGACGAGCGGGTGTTCGCCAGCCGCGCGCCTGCCGCCTTCGTGCGCCTTTTCGGAACGAACCGCGTCTTTCCCTACGTCTCTGGACGCGAGCAGGATGCCGGTGGCCGCCATATCCATGTGCCGCAGGGGCGCATGCCGGGCGGAAGCAGCTCGATCAATGGCATGATCTATATTCGCGGCGACGCGAAGGATTATGACGACTGGGCGGCGCAGGGCTGCGAGGGCTGGGGGTATGCGGACGTGCTGCCCTATTTCCGCAAGTCCGAACGAAACGATCGCATTGCCGACGCTTTCCATGGCGCCGACGGGCCTCTTTCCGTCACGGACATACCCCACCACCATCCGCTCAACAGCGCCTTCGTGCGGGCGGCCCAGCAGGCCGGCATTGCCTACAATCATGACTTCAACGGCGCCGCGCAACTCGGCGTCGGCTATTTCCAGGTGACCCAGGAAAATGGCGAGCGCGCCAGCACCGCGCGCGCCTATCTCCGGCCCGCCCTGTCACGCGGCAATATCGCACTGCGGTTGGAAGCGACGGTCGAGCGCGTCGTTCTCGAAAACGGCAGCGCGAAAGGCGTGCGCTGGCGGCAGGGGCAGGAGACGCACGAGGCGCAGGCCACCCGTGGCGTCATCGTGTGCGCCGGGGCCCTCGGCTCGCCGAAAGTGCTGATGCTTTCGGGTATCGGCCCGGCCGCGCATCTGTCCGAGCAGGGTATCGATGTGCTGCACGACCTGCCGGGCGTCGGCAGAAATTTCCAGGACCATCTGCAAATCCCGAATTACTACGCGACGCGCGCGCCGATCAGCCTTCTCGGTCAGGACAAGGGCCTGAACGCGATCCGCCACGGGCTGCAATGGCTTCTGTTCCGCAGCGGCCTCCTGACCTCGAACGTCGGTGAGGCAGCGGCCTTCGCCGATCTCGACGGCGATGGGCGGGCCGATGTACAGATCCATTCCTTCCCGGTCTTCGTGCCCGATCACGAGAGACCCGCACCGGATGGGCATTTCTTCTCGATCAGCCCGTGCGACCTCAGGCCGAAATCCCGCGGCGAGGTTCTGCTCGATGGCAAGGATCCGAACCGGCAGGTCAGGCTCGTCGCCAACGCGCTTGCCGATCCGGCTGATGTGGCGACCCTCGTCAAAGGCCTGAAGCTCTGCCGGGCAATCGCCAGGACGCCGGCGCTTTCGGCCTATCTCGGCGCCGAATACGCCATTGGCGGCACGCCGGACGACGCCGACGACATCCTGGCGGATTATGTCCGCAACTACGTGAAGACGGTCTACCATCCCGTCGGAACCTGCCGCATGGGGACCGGACCCGACGCGGTGGTGACGCCGCAGCTTCACGTGCGCGGCCTCGACAAGCTGTATGTGGTCGATGCATCCGTGATGCCCGCCATCGTCAGCGGCAACACCAATGCCCCGACGATCATGATCGCGGAGCGCGCGGCCGATCTCATCCGGGGAAAGACGCCGCTCTCGCCTGCCTGA
PROTEIN sequence
Length: 539
MSVVSAGQFDYIVIGAGSAGAVLANRLSEDAGTKILVLEAGPDERVFASRAPAAFVRLFGTNRVFPYVSGREQDAGGRHIHVPQGRMPGGSSSINGMIYIRGDAKDYDDWAAQGCEGWGYADVLPYFRKSERNDRIADAFHGADGPLSVTDIPHHHPLNSAFVRAAQQAGIAYNHDFNGAAQLGVGYFQVTQENGERASTARAYLRPALSRGNIALRLEATVERVVLENGSAKGVRWRQGQETHEAQATRGVIVCAGALGSPKVLMLSGIGPAAHLSEQGIDVLHDLPGVGRNFQDHLQIPNYYATRAPISLLGQDKGLNAIRHGLQWLLFRSGLLTSNVGEAAAFADLDGDGRADVQIHSFPVFVPDHERPAPDGHFFSISPCDLRPKSRGEVLLDGKDPNRQVRLVANALADPADVATLVKGLKLCRAIARTPALSAYLGAEYAIGGTPDDADDILADYVRNYVKTVYHPVGTCRMGTGPDAVVTPQLHVRGLDKLYVVDASVMPAIVSGNTNAPTIMIAERAADLIRGKTPLSPA*