ggKbase home page

SCNpilot_cont_500_bf_scaffold_6757_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 7053..7919

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFH5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 2.20e-118
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EYR82823.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 288.0
  • Bit_score: 445
  • Evalue 6.00e-122
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 286.0
  • Bit_score: 421
  • Evalue 2.10e-115
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGATGGCAAGACTTTCACACAACTTGACTGGGACGACCTGCGCCACTTCCTTGCGCTCGCCACGGCCGGCACATTCCTCGGCGCCGCAAAACGGCTGGGCGTCGAACATGCGACGATCAGCCGGCGGGTCTTAGCGCTCGAAATGCGTCTTGGACGAAAGCTCATCGACCGGCGCGGCCGCCGGTTCGTTCTGACCTCCGATGGGGAAAAGGTCGCCGAACTCGCCGCGACGATCGCCTTGCAGGCTGCGGCGATCGAACAATTGGGCCGAACCGGCACGACCGACCTTCGGGGCCATGTCCGTATCAGTGCGCCGCCGGCGCTTTCCAGCATGCTCCTTGCCAGGCCGCTCGTCGATCTTCGCCGTCGCCATCCCGGAATCCAGGTCACTCTTGTCGGCGAAAAACGCTTCGCGTCGCTCAACCGGAGAGAGGCGGATATTGCCGTGCGCCTGTCGCGTCCCGAGGAAGGTGATTACGTCATCATGAAAGTCGGCGAGATCGGTTTCCATCTCTATGCGGCGGAAGACTATCTCAGTTCGATCCCGCCGGAGGAATGGACGTTCATCGGCTATGACGAATCGATGAACGCGGCCGCGCAGCAGATACGCCTCCTGGAAATCGCCGCCGGCCGGCCCGTGGCGCTTCGATCTTCCGTCTTGGAATTCCAGGCCGCTGCCGCCCGGGCCGGCGGGGGCGTCGTCATGCTGCCCGACTTTGCCACGGAACAAAGCCCTGGCCTCCGCCGCGTCGAGGAGGAGGCGGCATTGACCAGGGATGTCTGGCTCGTCGTCCATTCACAGATCAAGGACGTCCCGGCGATCCGGTCTGTCGTCGATGCCCTCAAGTCGGCGTTTCGCCGCTAG
PROTEIN sequence
Length: 289
MDGKTFTQLDWDDLRHFLALATAGTFLGAAKRLGVEHATISRRVLALEMRLGRKLIDRRGRRFVLTSDGEKVAELAATIALQAAAIEQLGRTGTTDLRGHVRISAPPALSSMLLARPLVDLRRRHPGIQVTLVGEKRFASLNRREADIAVRLSRPEEGDYVIMKVGEIGFHLYAAEDYLSSIPPEEWTFIGYDESMNAAAQQIRLLEIAAGRPVALRSSVLEFQAAAARAGGGVVMLPDFATEQSPGLRRVEEEAALTRDVWLVVHSQIKDVPAIRSVVDALKSAFRR*