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SCNpilot_cont_500_bf_scaffold_7171_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2242..3021

Top 3 Functional Annotations

Value Algorithm Source
cobS1; cobalamin synthase (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 257.0
  • Bit_score: 279
  • Evalue 1.20e-72
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 260.0
  • Bit_score: 274
  • Evalue 1.30e-70
Cobalamin synthase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P4T6_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 257.0
  • Bit_score: 279
  • Evalue 3.70e-72

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
GTGTTGCGGGAATTTTGCGGCGATATCCTCCGTGCAACGGCGTTCCTGAGCCGGTTGCCGGTTCCGGCACGTTTCTTCGAGGGGCATGACGGGCGCATGGGCGGCCTGACCGGGGCCTTTGCCCTGTCCGGCCTGCTGCTCAGCCTTCCGGCCGCCCTGCTCGCCGCGCTGCTGATCGCCGGTGATGCGCCGCCGCTGCTTTCCGCTCTCCTGGTGCTCAGTCTCCAGACGCTGGTGACCGGCGCGCTGCATGAGGACGGCTTTGCCGATTGCGCCGATGGGCTCGGCGGCGGGCGGGATCGCGATCGTGCGCTTGCCATCATGAAGGACAGCCGCATCGGCGCCTACGGGGTGATCGCGCTGGTGCTCGGCTTTGGCCTGCGCGCCTCCGCGTTCTCGGCGCTGATGGATGTGGCAACCCCGCTTTTTGTCGCGCTCGCCTTCCTGCTGGCGCAGGCGGTCAGCCGCGCCGCCATGGCCTGGCACTGGCAGGCCCTTCCCTCGGCCCGGCCCGGCGGCGTGGCCGATTCGGCCGGCCTGCCGGAACACGGTTCCGTGCTGGTCTGCATCGGCACGGCGCTGCTTGCGGCGCTCGTTTTCGTCGTCCTCGACCTGCCGCTGCTGCCGGTCGTCGTCGCCGTGCTTCTGGCGGGGGTCGTCACGGCCGGGTTTTCCCGTTTCGTGCGCCGCAAGATCGGCGGCCACACCGGCGATACCATCGGCTCCACGCAGCAACTCGCCGAAATGGCGGTGCTCGTCGCCCTTGCCTTGATGGCGTGA
PROTEIN sequence
Length: 260
VLREFCGDILRATAFLSRLPVPARFFEGHDGRMGGLTGAFALSGLLLSLPAALLAALLIAGDAPPLLSALLVLSLQTLVTGALHEDGFADCADGLGGGRDRDRALAIMKDSRIGAYGVIALVLGFGLRASAFSALMDVATPLFVALAFLLAQAVSRAAMAWHWQALPSARPGGVADSAGLPEHGSVLVCIGTALLAALVFVVLDLPLLPVVVAVLLAGVVTAGFSRFVRRKIGGHTGDTIGSTQQLAEMAVLVALALMA*