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SCNpilot_cont_500_bf_scaffold_7573_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(11603..11989)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B619_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 128.0
  • Bit_score: 207
  • Evalue 1.20e-50
MerR family transcriptional regulator {ECO:0000313|EMBL:KGE00611.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 128.0
  • Bit_score: 209
  • Evalue 2.50e-51
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 128.0
  • Bit_score: 206
  • Evalue 4.70e-51

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGGAAAAATATTACAGTATTACCGACCTGACGCGGGAATTCGACGTTTCGACGCGCACGCTCCGCTTCTATGAGGACGAGGGGCTGATCCAGCCGGATCGTCGCGGCCGTACCCGCCTCTACCGCGCCGAGGACCGGCGGCTGGTGCAGGAAATCCTGCGCGGCCGGCGCATCGGCTTGACGGTCGCGGAAATCCGTGAGCTGATCCGTGTTTACAAAGAGCCGCCGAGCGATGCCGGCGAATTGACCACGCTGATGAAGAGCGTCGCCGAGAAACGGGAAGAGCTGCGCCGCAAGCGCAAGGATATCGACGATACGCTGGCCGATCTCGACCTGATAGAGGAGGCCTGTCTCACGCGCCTCGCCGAAATCGGCGTGGGAACGTAG
PROTEIN sequence
Length: 129
VEKYYSITDLTREFDVSTRTLRFYEDEGLIQPDRRGRTRLYRAEDRRLVQEILRGRRIGLTVAEIRELIRVYKEPPSDAGELTTLMKSVAEKREELRRKRKDIDDTLADLDLIEEACLTRLAEIGVGT*