ggKbase home page

SCNpilot_cont_500_bf_scaffold_11292_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 5964..7028

Top 3 Functional Annotations

Value Algorithm Source
Leu/Ile/Val-binding protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZZ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 371.0
  • Bit_score: 660
  • Evalue 1.00e-186
  • rbh
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR81545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 371.0
  • Bit_score: 660
  • Evalue 1.50e-186
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 373.0
  • Bit_score: 559
  • Evalue 7.90e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAAGCGCATTCTGATTATCGGCACGGCCATCGGCCTGCTCATGGGCACGGCGGCGCGCGCCGAGGATCTGACCTTCGCGGTGGCCGGCCCGCTGACCGGCCCGCTCGCCACCATCGGCGACCAGTTCCGGCAGGGCGCGCAGGCGGCGGCCGATGCCATCAACGCCAAGGGCGGCGTGATGGGCCGCAAGATCAAGCTGCAGTTCGAAGACGACCAGTGCGATCCGAAGCAGGCCGTTTCGGTCGCCAACCGCATTGCCGCCAGCGGCATCAATTTCGTCGACGGCCATGCCTGCTCGGGTTCGAGCATCCCGGCCTCCGCCGTCTATGCCGAAAACGGCACGCTGATGATGAGCCCGGCCTCCTCCAACCCGGTCATGACGGATGATGCCGCCGCCAAGGGCTGGACCAACATCATGCGCCTTTACACCCGCGACGATGCGCAGGGCGCCTTCATCGGCCCGTGGATCGCCAAGGAATATGCCGGCAAGAAGGTCGCCGTGCTGCATGACAAGACCGCCTATGGCCAGGGCGTCGCCGATGCGGTGCGCGCCACCATGAACGCCAGCGGCCTCAAGGAAACGCTCGCCGAAAGCATCAACCCCGGCGAAAAGGATTACAACGCGCTGGTGACGAAGCTGAAGGACGCCAAGATCGACGTCGTCTATTTCGGCGGCTACCACCCGGAAGCCGGCCTGATCCTGCGCCAGGCGGCCGAGCAGGGCTACAAGTTCCAGCTCATCATGCCCGATTCCATCGCCTCGCCGGAATTCTGGCAGGTTTCCGGTCCGGCTGGCGAAGGCACGCTGTTCGTCTTCCCCTCCGGCGGCTTCAAGCCGGAAGGCTTCACGCTGTTCTCCTACGCCGTCATCCAGGCCTTCGCGCAAGGCATCGAACGCGCCGGCTCCGACGATCCGACCAAGGTCGCGGCTGCCTTGAAGGACGGCCAGCCGATCGACACCGTCGTCGGCACCGTCACTTTCGACGAGAAGGGCGACCTGAAGAACGCCAGCTACGACATCAACCGCTGGAGCAACGGCGCCTACGCACCGATCGCGAAATAA
PROTEIN sequence
Length: 355
MKRILIIGTAIGLLMGTAARAEDLTFAVAGPLTGPLATIGDQFRQGAQAAADAINAKGGVMGRKIKLQFEDDQCDPKQAVSVANRIAASGINFVDGHACSGSSIPASAVYAENGTLMMSPASSNPVMTDDAAAKGWTNIMRLYTRDDAQGAFIGPWIAKEYAGKKVAVLHDKTAYGQGVADAVRATMNASGLKETLAESINPGEKDYNALVTKLKDAKIDVVYFGGYHPEAGLILRQAAEQGYKFQLIMPDSIASPEFWQVSGPAGEGTLFVFPSGGFKPEGFTLFSYAVIQAFAQGIERAGSDDPTKVAAALKDGQPIDTVVGTVTFDEKGDLKNASYDINRWSNGAYAPIAK*