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SCNpilot_cont_500_bf_scaffold_11292_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(7532..8071)

Top 3 Functional Annotations

Value Algorithm Source
L-threonine dehydratase catabolic TdcB {ECO:0000313|EMBL:EYR77399.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EYR77399.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 145.0
  • Bit_score: 256
  • Evalue 2.50e-65
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 145.0
  • Bit_score: 242
  • Evalue 8.30e-62
L-threonine dehydratase catabolic TdcB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX21_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 145.0
  • Bit_score: 256
  • Evalue 1.80e-65

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCACATTCCCACGGATGCGACGGTGATCTATGGATTGGGCAGCAAACAGCCCGGAAGCGTGTTTATGACATCCATCGAAATGATCGCCGCCGCCCGCGCCCGCCTGCAGGGCCATATCCGCCGCACGCCATTATTGTCGTCGCCGTTCTTCGACGAGATGGCCGGGCGGCGCGTCTTCGTAAAGGCGGAATGCCTGCAGCATACCGGTTCGTTCAAGTTTCGGGGCGGCTGGTCCGCGCTTTCGGGGCTGGGGCCGCAGGTTCGCAGCCGTGGCGTGATCGCGTTTTCCTCGGGAAACCATGCGCAAGGGGTCGCCCTTGCCGCAAAGCGGCACGACGTTCCCTCGGTGATCATCATGCCCGCCGACGCGCCCCGGCTGAAAATCGAGAATACGCGCGCCTTCGGCGCGGATGTCGTTCTCTACGACCGCGAAAAGGAAGATCGTGACGCCATCGGCGCCCGTTTGTCCGAGGAGCGTGATCTCACCTTGATAAAGCCGCGGCCGAGGTTCTGGTGCCCTGCGGCGGCGGCGGACTGA
PROTEIN sequence
Length: 180
MHIPTDATVIYGLGSKQPGSVFMTSIEMIAAARARLQGHIRRTPLLSSPFFDEMAGRRVFVKAECLQHTGSFKFRGGWSALSGLGPQVRSRGVIAFSSGNHAQGVALAAKRHDVPSVIIMPADAPRLKIENTRAFGADVVLYDREKEDRDAIGARLSEERDLTLIKPRPRFWCPAAAAD*