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SCNpilot_cont_500_bf_scaffold_9338_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(792..1889)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 30S ribosomal protein S3, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1847D similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 363.0
  • Bit_score: 505
  • Evalue 3.40e-140
  • rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 240.0
  • Bit_score: 454
  • Evalue 1.60e-124
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 450
  • Evalue 7.00e-124
  • rbh

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGGGTCAGAAAATCAATCCGATCGGTTTTCGCCTCGGCATCAACCGTACCTGGGACAGCCGTTGGTTCGCCGACAACGCCGAATACGGCCAACTGCTGCATGAAGACCTGAAGATCCGCGCTTACCTGATGGAAGAGCTGAAGCAGGCCGGCATCGCCAAGGTGGTCATCGAGCGTCCGCACAAGAAGTGCCGCGTCACGATCCACTCGGCTCGCCCGGGCCTGATCATCGGCAAGAAGGGCGCCGACATCGAGAAGCTTCGCAAGAAGCTTTCGGAGATGACGAACTCGGAAACGCACCTCAACATCGTTGAAGTGCGCAAGCCGGAAATCGACGCGACGCTCGTCGCCCAGTCGATCGCCCAGCAGCTCGAGCGCCGAGTGGCTTTCCGCCGTGCGATGAAGCGCGCTGTTCAGTCGGCCATGCGTCTTGGCGCCGAAGGCATCAAGATCACCTGCGCCGGCCGTCTCGGCGGCGCCGAGATCGCCCGTACGGAATGGTACCGCGAAGGTCGCGTTCCGCTTCATACGCTGCGTGCGGACATCGACTACGGTACGGCTGAAGCCGAAACCGCGTTCGGCATCTGCGGCATCAAGGTCTGGATTTTCAAGGGCGAAATCCTTGAGCACGACCCGATGGCATCCGAGCGCCGTTCGCTGGAAGGCGACGCGCAGGGTCCGAGCGGCCGTCAGCCAAAGCGCACCAAGTACCGCAAGCAGTTCAAGGGCCGCATCAAGGGCGTCGCCAAGGGCGGTTCTGAGCTTGCATTCGGCGAATTCGGCCTGAAGTCTCAGGAACCGAACCGCGTCAACGCACGCGAGATCGAAGCGGCCCGCCGCGCGATCACCCGCTACATGAAGCGTGCGGGCCGCGTGTGGATCCGGGTGTTCCCGGATGTCCCGGTGACCGCCAAGCCTACCGAAGTCCGTATGGGTAAGGGTAAGGGTTCCGTCGAATACTGGGCTTGCAAGGTCAAGCCTGGTCGTATGATGTTTGAGATCGATGGCGTCAGCGAAGAAATCGCTCGTGAGGCTCTGCGCCTCGGTTCTGCCAAGCTCTCGGTTAAGACGCGCTTTGTACAGCGCATCGCAGAGTGA
PROTEIN sequence
Length: 366
MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKQAGIAKVVIERPHKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRADIDYGTAEAETAFGICGIKVWIFKGEILEHDPMASERRSLEGDAQGPSGRQPKRTKYRKQFKGRIKGVAKGGSELAFGEFGLKSQEPNRVNAREIEAARRAITRYMKRAGRVWIRVFPDVPVTAKPTEVRMGKGKGSVEYWACKVKPGRMMFEIDGVSEEIAREALRLGSAKLSVKTRFVQRIAE*