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SCNpilot_cont_500_bf_scaffold_9338_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3423..3716)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Rhizobium sp. CF122 RepID=J2JCL2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 173
  • Evalue 1.10e-40
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 173
  • Evalue 1.50e-40
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 168
  • Evalue 1.10e-39

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGACGGATCTTCGCCATTACGATGTGATCGTCACGCCGGCGATCACCGAAAAGTCCACCCTGGTTTCTGAATATAACCAGGTTGTTTTCAACGTTGCGAAGACCGCGACCAAGCCGGAAATCAAGGCTGCTGTCGAAGCGCTCTTCGGCGTCAAGGTCAAGGCTGTCAACACGCTGCTGCGCAAGGGCAAGACCCGTCGCTTCCGCGGCATTGCCGGCCGGACCCAGGACGTCAAGAAGGCGATCGTCACGCTGGCCGAGGGTCAGACGATCGACGTCTCCACCGGCCTCTGA
PROTEIN sequence
Length: 98
MTDLRHYDVIVTPAITEKSTLVSEYNQVVFNVAKTATKPEIKAAVEALFGVKVKAVNTLLRKGKTRRFRGIAGRTQDVKKAIVTLAEGQTIDVSTGL*