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SCNpilot_cont_500_bf_scaffold_11953_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(3534..3902)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 236
  • Evalue 2.40e-59
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 122.0
  • Bit_score: 223
  • Evalue 2.70e-56
RNA-splicing ligase RtcB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 236
  • Evalue 1.70e-59

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GAAACGCACGGTGGCGAGGACTTGCTGGTGACCCGCAAGGGTGCGGTGAGCGCGCGGGCCGGCGAGCTGGGCATCATCCCGGGCAGCATGGGTACGTGCAGCTACATCGTGCGTGGCAAGGGCAATCCGGAAAGTTTCCACAGCTGCAGCCACGGCGCGGGCCGGGTGATGAGCCGTACCGCGGCGCGCCAGCGGATCACGCTGGCGCAGCATCGGGAGGCCACCGCCCATGTCGAATGCCGCAAGGACGCGGCGGTGATCGACGAATCGCCGGCGGCGTACAAGTCGATCGACGCGGTTATGGCGGCGCAGTCCGACCTGGTCGACGTGGTGCACACGCTGCGCCAGGTGCTGTGCGTGAAGGGATGA
PROTEIN sequence
Length: 123
ETHGGEDLLVTRKGAVSARAGELGIIPGSMGTCSYIVRGKGNPESFHSCSHGAGRVMSRTAARQRITLAQHREATAHVECRKDAAVIDESPAAYKSIDAVMAAQSDLVDVVHTLRQVLCVKG*