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SCNpilot_cont_500_bf_scaffold_4713_1

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 52..267

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraI n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036C9A12 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 71.0
  • Bit_score: 133
  • Evalue 9.00e-29
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EZP81834.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 71.0
  • Bit_score: 134
  • Evalue 7.40e-29
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 71.0
  • Bit_score: 132
  • Evalue 4.80e-29

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
TTGCTCGGCGTCGGGGCCGCGCTGGGGGCCGACAGCGAGGACGATCTGACTCGCGCGCTGCGCCGCGGCTCGCAGGACACCATCAATCAGACCGGCCAGCAGATCGTGCGCCGCCAACTCAACGTGCAGCCAACGCTCACCATCCGGCCGGGGCATCCGCTTAGGATCGTCCTGACCCGCGACCTTGTCCTCGAACCCGTTGGAGCAACACAATGA
PROTEIN sequence
Length: 72
LLGVGAALGADSEDDLTRALRRGSQDTINQTGQQIVRRQLNVQPTLTIRPGHPLRIVLTRDLVLEPVGATQ*