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SCNpilot_cont_500_bf_scaffold_4713_6

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2629..3861)

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Variovorax paradoxus RepID=UPI00037DBC8B similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 569
  • Evalue 2.20e-159
  • rbh
HlyD family type I secretion membrane fusion protein; K12542 membrane fusion protein LapC similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 569
  • Evalue 6.80e-160
  • rbh
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ACS21205.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 569
  • Evalue 3.00e-159

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGATTGCCCGAGCCGGATTCATATCCGCCCTGCGCGGCTCATCGTCTGACGGGCATGTTACGAGTTTGCCCGACTTGACCGATCTCAACGAAACGCGGGCCACGCGGTCAACCCGTGTCATCTGGCTGGTCGCCCTGTTCCTGGTGATCTTCTTTGCCTGGGCCTGGTTCTTCGAGATCGACGAGGTGTCGAGCGGCACCGGCAAGGTCATTCCCAGCTCGCGCGAACAGGTGATCCAGACCCTGGAAGGCGGCATCCTGTCGAAGCTCAACGTCCGCGAGGGCCAGCTTGTCGAGAAGGGGACGGTACTCGCTCAATTGGACCCGACGCGCGGTGAATCGAGCGTCGAGGAAACGGCCGCGCGCTATCGTGCCGCGCTGGCGGCGAGCGCCCGTTTGCAGGCCGAAGTGGCGGGGAACTCCGGCATCGCCTTCCCATCGGAACTGGATAACTGGCCGCAGCTCAAAGCGACCGAGACGGCGCTGTTCCAGTCCCGGCGCGCCAGCCTCAACGAAACGGTGAGCGGTCTCAATCAGGCGCTGGTCCTCGCCCGGCGCGAACTGGGCATCACCCAATCGCTGATGGCGAGCGGGGCTGCGAGCAATGTCGAGATGATCCGCCTGCAGCGTCAGGTGGCCGATCTCGAGCTGAGACTGAGCGAGGCGCGCTCGGCCTATATGGTCAAGAGCCGCGAGGATCTGACCAAGGCCGATGCCGATGTGAAATCGCTGCAATCGGTGGTGCGGGGGCGCGAGGACACGCTCGACCGCACGACCCTTGTCGCGCCGGTGCGCGGCATCGTGAAAAGCCTCAACGTGACGACGATCGGCGGTGTGGTCCCGCCTGGCGGTTCGGTGATGACGCTGGTGCCGATGGGTGACCAGCTCCTGGTCGAGACGCGGATCTCACCGCGCGACATCGCCTTCATCCACCCCGGCCAGAGCGCGATGGTGAAGGTTACGGCCTATGACTATTCGATCTATGGCGGCCTGGAAGCCAAGGTCGAGACGATCACGCCCGATACGCTGCGTGACGAGGTCAAACCCGAGATCGTCTATTACCGGGTTCTCATACGCACCAGTTCCGATGCGCTGACCGACAAGGCCGGCCGTCGCCTGCCGATCACGCCGGGCATGGTGACGACCGCCGACATCCGCACCGGCCGCAAGACCGTGTGGGACTATCTGACCAAACCCCTGAACAAGGCGCGCGAAGCGATGCGCGAGCGCTGA
PROTEIN sequence
Length: 411
MIARAGFISALRGSSSDGHVTSLPDLTDLNETRATRSTRVIWLVALFLVIFFAWAWFFEIDEVSSGTGKVIPSSREQVIQTLEGGILSKLNVREGQLVEKGTVLAQLDPTRGESSVEETAARYRAALAASARLQAEVAGNSGIAFPSELDNWPQLKATETALFQSRRASLNETVSGLNQALVLARRELGITQSLMASGAASNVEMIRLQRQVADLELRLSEARSAYMVKSREDLTKADADVKSLQSVVRGREDTLDRTTLVAPVRGIVKSLNVTTIGGVVPPGGSVMTLVPMGDQLLVETRISPRDIAFIHPGQSAMVKVTAYDYSIYGGLEAKVETITPDTLRDEVKPEIVYYRVLIRTSSDALTDKAGRRLPITPGMVTTADIRTGRKTVWDYLTKPLNKAREAMRER*