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SCNpilot_cont_500_bf_scaffold_4993_5

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(6356..6946)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3597302 bin=GWF2_Bacteroidetes_49_14 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 191.0
  • Bit_score: 170
  • Evalue 1.40e-39
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 195.0
  • Bit_score: 142
  • Evalue 1.30e-31
Tax=GWF2_Bacteroidetes_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 191.0
  • Bit_score: 170
  • Evalue 2.00e-39

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Taxonomy

GWF2_Bacteroidetes_49_14_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
TTGGAACAGAATTCACTGCATAATGAGAAAGACCTGTTGCTCCGGGTAGCTGAAGGCGATGAAACCGCTTTCAGGGTGCTGTATGACTATTACCGTAAAAAGATATATGCGCTGGGTTTATTTCTCACCAGATCTGAAAGCCAGGCACAGGAGCTGGTACAGGATGTCTTTCTGAGAATATGGGAAAAGCGGGAGCAACTGCGAAAGGTTGATTATTTCAATTCGTGGCTCCGTACCATAGCCCGCAATACCGCTATTAATTATATACGTGCCGGGGCAATGGAAAAATTGGGGCTTAACCGCCTGCCAACGCAGGAAAGCAGCAATTGCTTTACAGAAAACGACGTTGCCGACAGGGAATACTCCCTGCTATTGCAGTCCGCCGTCAGGCAGCTTCCGCCACAGCAGCAAAAAGTATATATTCTTTACCGGCAGCAGGGATTGCGCCATGAAGCCATTGCCCAACAACTGGGTATATCGGTATTGACTTCCAAAAAATATATGAAGCTCGCTCTTCGCTCCATCAGGATATTCCTGGAGCACAGGATGGACGCCGCTGTATTGCTCGCTATTGCTATTTGTTTCCGCTGA
PROTEIN sequence
Length: 197
LEQNSLHNEKDLLLRVAEGDETAFRVLYDYYRKKIYALGLFLTRSESQAQELVQDVFLRIWEKREQLRKVDYFNSWLRTIARNTAINYIRAGAMEKLGLNRLPTQESSNCFTENDVADREYSLLLQSAVRQLPPQQQKVYILYRQQGLRHEAIAQQLGISVLTSKKYMKLALRSIRIFLEHRMDAAVLLAIAICFR*