ggKbase home page

SCNpilot_cont_500_bf_scaffold_4822_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(4336..5082)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=3 Tax=Alistipes RepID=I3YKW7_ALIFI similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 229.0
  • Bit_score: 201
  • Evalue 1.20e-48
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 229.0
  • Bit_score: 201
  • Evalue 3.80e-49
Transcriptional regulator {ECO:0000313|EMBL:AFL77635.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 229.0
  • Bit_score: 201
  • Evalue 1.70e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alistipes finegoldii → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
ATGAACAATAAAGCAAAAAACGGAACACTGGTAGATTGGGTTGAAAGCCTGATTATCAAGACAATAAAGGAAAACGAAATGAAATCCGGGGCTGAAATACCTAATGAAATGGAGCTTGCCGAGAAATATGAAGTGGGGAGAAATGTTGTCAGAGAAGCGTTAAGCAGATTGAGGATGTTAGGCATTATTGAAAGCCGTACCCGTCGGGGAATGGTCGTTTCAGAACCTAATGTTATGTATGGATTTCAAAAAGTTCTAAATCCTCATACATTAAGCCGCGAAACCATCCTTAATCTTTTAGGCATGAGAGTCTCATTAGAGATAGGATGTGCAAGTATTGTGATAAATAATATAACGGATGAAGATATTGAGGAACTTAAGTTAATTGTCGCTAAAGAAAATGCTATCAAAAGTCAAAAGATAGATATTGAGATGGAAAGGGCTTTTCACACCAAAATATACCGGGTTGCAAATAATCAGGTGATGTTGGATTTTCTTGATTTGCTAATTCCTGTTTTTAAGTTCGTTAACGAAAACTTTGAGGACTTTGACAAATTTAACCAGTTAGTTAAAAGGCAATCCAGGATAGTAAGACATAAAGACATTATTCCATATCTTGAAAATAGAGATATAAAGGGTTATCAACTTGCGGTAGAAGATCATTTGAGAGTTTACCTGGAGTATATCGCAGATTCTCAGAAAAAGAATAAAAGGCAAAATCACACTGACAAGAAGCTACATTTTTAG
PROTEIN sequence
Length: 249
MNNKAKNGTLVDWVESLIIKTIKENEMKSGAEIPNEMELAEKYEVGRNVVREALSRLRMLGIIESRTRRGMVVSEPNVMYGFQKVLNPHTLSRETILNLLGMRVSLEIGCASIVINNITDEDIEELKLIVAKENAIKSQKIDIEMERAFHTKIYRVANNQVMLDFLDLLIPVFKFVNENFEDFDKFNQLVKRQSRIVRHKDIIPYLENRDIKGYQLAVEDHLRVYLEYIADSQKKNKRQNHTDKKLHF*