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SCNpilot_cont_500_bf_scaffold_5311_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(2047..3624)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase LigC {ECO:0000313|EMBL:CDP52869.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CDP52869.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 525.0
  • Bit_score: 910
  • Evalue 9.20e-262
ATP-dependent DNA ligase LigC; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 525.0
  • Bit_score: 824
  • Evalue 2.60e-236
ATP-dependent DNA ligase LigC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGY5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 525.0
  • Bit_score: 824
  • Evalue 8.10e-236

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
GTGAGGCGCTTCGCGCAGTTGATGGAGCTGCTGGCGCTCACCCCGTCGCGCAACCGCAAGCTCGAAGCGTTGACCCAATATTTCCGCGAGACGCCGGACCCGGACCGCGGCTTCGCGCTCGCCATCCTCACCGGCGCCCTGAGCTTCAAGAACGTCAAGCCGGCGATCCTGCGCGATGTCGTCCTCGCCGAGGTCGACCCGCATCTGTTCGCGCTGAGCTACGACTATGTCGGGGATCTTGGCGAGACCATTGCGCTGATCTGGCCGCATCATGGCGGCACCGAACCGCTGCCGTCGCTATCGGACCTGGTCGAGCTGTTCAACATGACCAGCAAGTCCGAACTGCCGCGCCTGATCGGCTCGCTGCTGACCCGGGCGTCGATCAACGAGCGCTGGGCGCTGGTGAAATTCGCCACCGGCGCGCTGCGCATCGGCGTCAATGCACGACTGGCCAAGACCGCCTTGGCCGAGATGAGCGGCAAGGACCTGCAGGAGATCGAGGAAGTGTGGAACGGTCTCACCGTTCCTTACGCAGACCTGTTCGCCTGGCTCAGCGGCAAGGCCGATCGACCGGACATCGACCATACGGCGCGCTTCCATCCGCTGATGCTGTCCAACCCGATCGACGAGAGCAAGGATCTCGAAAAGCTCGACCCAGCCGATTTCGTCGCCGAGTGGAAATGGGACGGCATAAGGGTGCAACTGATCGCCTCGCAGGGCAGGGTGTCGCTGTTCTCGCGGACCGGCGACGATATCGCTGCCGCTTTCCCCGATGTGACGGAGAGTGTCTTCGGCGACGCGGTGCTCGACGGCGAATTGCTGGTCGGAGCGGATTTCGAACCGCTGCCGTTCAACGATCTGCAGCAGCGGCTCAACCGCAAGGTGGCGACGGCCAGGCATCTGGCCGACTATCCCGGGTTCGTCCGCGTCTACGACATGCTGTTCGATGGCAACGAGGATATTCGCGCGCTGGCATGGAGCGAGCGGCGGCAGCGGCTGGAGGCGTGGTTCGCAACGCACCCGCAGACCCGCCTCGACCTGTCGCCGGTGCTTGCCTATCGCGATTGGGACGATCTCGCCGAGATCCGCCGCCGCGGCGCTGCCGAGCAGGGGCACGAAGGGGTGATGGTGAAGCTGAGGAGCGCGCCCTATGTGCCGGGACGGCCGAAGGGCCTGTGGTACAAATGGAAGCGCGATCCGAACGTCGTCGATGCCATCCTGATGTACGCGCAGCGCGGTCACGGCAAGCGCTCGTCGTTCTATTCCGACTATACGTTCGGGGTGTGGAAGGGCAACGAGATCGTGCCGATCGGCAAAGCCTATTTCGGCTTCACCGACGAGGAATTGAAGCATCTCGACAAATGGGTGCGCAACAACACCGTCGCCAGCTTCGGCCCGGTGCGCGAGGTCACCAAGGAACTGGTGTTCGAGGTGGCGTTCGACAGCGCACAGCAATCGGGCCGGCACAAATCCGGCATCGCGCTTCGCTTCCCCCGCATCAACCGGATAAGGTGGGACAAGCCGGCCAGCGAGGCCGCAACGCTCGAAGAAATGCAGGTTTTCCTGACCGCCACATAG
PROTEIN sequence
Length: 526
VRRFAQLMELLALTPSRNRKLEALTQYFRETPDPDRGFALAILTGALSFKNVKPAILRDVVLAEVDPHLFALSYDYVGDLGETIALIWPHHGGTEPLPSLSDLVELFNMTSKSELPRLIGSLLTRASINERWALVKFATGALRIGVNARLAKTALAEMSGKDLQEIEEVWNGLTVPYADLFAWLSGKADRPDIDHTARFHPLMLSNPIDESKDLEKLDPADFVAEWKWDGIRVQLIASQGRVSLFSRTGDDIAAAFPDVTESVFGDAVLDGELLVGADFEPLPFNDLQQRLNRKVATARHLADYPGFVRVYDMLFDGNEDIRALAWSERRQRLEAWFATHPQTRLDLSPVLAYRDWDDLAEIRRRGAAEQGHEGVMVKLRSAPYVPGRPKGLWYKWKRDPNVVDAILMYAQRGHGKRSSFYSDYTFGVWKGNEIVPIGKAYFGFTDEELKHLDKWVRNNTVASFGPVREVTKELVFEVAFDSAQQSGRHKSGIALRFPRINRIRWDKPASEAATLEEMQVFLTAT*