ggKbase home page

SCNpilot_cont_500_bf_scaffold_5695_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 4986..6137

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 381.0
  • Bit_score: 671
  • Evalue 6.90e-190
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 381.0
  • Bit_score: 559
  • Evalue 1.10e-156
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R926_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 381.0
  • Bit_score: 559
  • Evalue 3.60e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGACCTGAATTCGCTTGATCTGCCCAAGCGTCCCCAAGACACGCGCGTCGTGGTCGCGATGTCGGGGGGCGTCGATAGTTCGGTCGTTGCCGGGCTGCTGGCCCGCCAGGGCTATGATGTGGTGGGGGTAACCCTCCAGCTTTACGACCATGGCGAAGCGACGCATCGCAAGGGCGCCTGCTGCGCGGGACAGGATATCCATGATGCGCGGCGCGTGGCGCAGGCGCTCAATATCCCGCATTACGTGCTCGACTATGAAGAGCGCTTCAAGAATGCGGTGATGGAGCCGTTCGCCAATGCCTATCGGCAGGGCGAGACACCGGTGCCGTGCATCGCCTGCAACCAGAGCGTCAAGTTCGTCGACCTGATGGAAGTGGCGAGGGACCTCGGCGCCGACGTGCTGGCGACCGGGCACTACGTGCAGTCGAGGCTCGTCGACGGCAAGCGCCGGCTCTATCGGCCGGTCGATGACTCGCGCGACCAGAGCTACTTCCTGTTCGCCACCACCGAAGAGCAGCTGGATTTCCTGCGCTTCCCGCTCGGCGGCATGACCAAGCCCGCAGTGCGCGAACTGGCGCGCGAGTTCGGGCTGGAGATCGCCGAAAAGCACGACAGCCAGGACATCTGTTTCGTGCCGCAGGGCAAATATGCCGACGTGATCCGCAAGATGCACCCCGAAGCGCTGGCCGAGGGGGAGATCGTCCATCTCGATGGGCGGGTGCTGGGCAAGCACGAGGGGATCGTCAATTACACCATCGGGCAACGCAAGGGCCTCGGGGTTGCGGCGGGCGAGCCGCTCTATGTGGTCAAGCTCGAGCATCGCACCGGACGGGTGATCGTCGGCCCGCGCGAAGCGCTGATGACCAAGACGGTGAAGCTCAGGGACGTGAACTGGCTGGGTGAGCGGGAGCTCGCCTCGCTGGCGGCCGGCAACGGCATGCCGATCGAGGTGAAGGTGCGCTCGACGCGGCCGCCGCAGTCGGGCGCCGTGCACATGGCCGATGGCGAAGTGTTCGTCACGCTGTTCGCCGGCGAGTACGGCATTTCGCCGGGACAGGCCTGCGTGTTCTACGCCGATGAGAGCGAGACCAGCGAAGTGCTGGGCGGCGGCTTCATCGCCGAGGCAGTGCCGACGGCGCTGGTGGCTTAG
PROTEIN sequence
Length: 384
MDLNSLDLPKRPQDTRVVVAMSGGVDSSVVAGLLARQGYDVVGVTLQLYDHGEATHRKGACCAGQDIHDARRVAQALNIPHYVLDYEERFKNAVMEPFANAYRQGETPVPCIACNQSVKFVDLMEVARDLGADVLATGHYVQSRLVDGKRRLYRPVDDSRDQSYFLFATTEEQLDFLRFPLGGMTKPAVRELAREFGLEIAEKHDSQDICFVPQGKYADVIRKMHPEALAEGEIVHLDGRVLGKHEGIVNYTIGQRKGLGVAAGEPLYVVKLEHRTGRVIVGPREALMTKTVKLRDVNWLGERELASLAAGNGMPIEVKVRSTRPPQSGAVHMADGEVFVTLFAGEYGISPGQACVFYADESETSEVLGGGFIAEAVPTALVA*