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SCNpilot_cont_500_bf_scaffold_6718_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(5021..5599)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136A1_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 189.0
  • Bit_score: 232
  • Evalue 2.90e-58
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 189.0
  • Bit_score: 232
  • Evalue 9.20e-59
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABE40088.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 189.0
  • Bit_score: 232
  • Evalue 4.10e-58

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCACGCCCCAAACTCGTTTCCGACGATCAGGTCCTCGATGCCACCCATGCCGTCATGCTGCGGCTCGGGCCCGAGCGCTTCACGCTTTCCGATGTCGCCGAAGCGGTGGGGCTGAGTCGCGCCGCGCTGATCCAGCGCTTCACCGACAAGCGCACATTGCATCTCAAGACCCTGGAACGCTCGACCCAGGAGGTGCGCGACTATTTCGCGGCCGCGCCGCGGGAGCAGGGGCTGATCCCGCTCTGGGCCATGCTGCGTGACCTGATCAGCGGCATGGGGTCGGGCGAAGGCTTTGCCGGCTACCTGCTGCTCGCCTGGGGCGACGTCAACGACCCCGGGCTGAACGCGCTGGCCCGTGAACGCAACCAGCTGGTGCGGGGCGCCATCTTTGAGCGCCTCCCGGAAACGCCTGACCGGGCAGAGTCGGCGGCGCTGATCCAGATGGTGATCCAGGGCGCCTGCATGCTGTGGCTGGTCGAGCCGCAGGGGACGCTCGCCGGCTACACCGAAGACGAGACGCGGAAGCTGATCGCGCGGCTCTATCCGGGCGAGCGGCTGGAGCAGGGCGCCGACTGA
PROTEIN sequence
Length: 193
MPRPKLVSDDQVLDATHAVMLRLGPERFTLSDVAEAVGLSRAALIQRFTDKRTLHLKTLERSTQEVRDYFAAAPREQGLIPLWAMLRDLISGMGSGEGFAGYLLLAWGDVNDPGLNALARERNQLVRGAIFERLPETPDRAESAALIQMVIQGACMLWLVEPQGTLAGYTEDETRKLIARLYPGERLEQGAD*