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SCNpilot_cont_500_bf_scaffold_16446_12

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: comp(4688..4960)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC39_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 90.0
  • Bit_score: 148
  • Evalue 4.50e-33
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_500_bf_scaffold_16446_11]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 172
  • Evalue 2.40e-40

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGCGTTCTGGATTGATCGCACAGAAGCTGGGTATGACCCGCATCTTCGCCGAGGACGGCTCGCACGTCCCCGTGACGGTGCTTAGCCTGCAGAATTGCCAGGTGGTGGGCCAGCGGACCGTTGACAAGGACGGTTATACAGCGCTGCAGCTCGGCGCTGGCCAGGCAAAGGCCAAGAATGTTTCCAAGGCCGAGCGTGGGCAGTATGCCGTCGCCAAGGTCGAACCCAAGCGTCACGTCGCAGAATTCCGCGTCGATGCCGAGAACCTGTGA
PROTEIN sequence
Length: 91
MRSGLIAQKLGMTRIFAEDGSHVPVTVLSLQNCQVVGQRTVDKDGYTALQLGAGQAKAKNVSKAERGQYAVAKVEPKRHVAEFRVDAENL*