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SCNpilot_cont_500_bf_scaffold_6241_4

Organism: SCNPILOT_CONT_300_BF_Armatimonadetes_55_34

partial RP 39 / 55 BSCG 34 / 51 MC: 3 ASCG 7 / 38
Location: 3049..3609

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma24 n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B46920 similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 178.0
  • Bit_score: 121
  • Evalue 7.10e-25
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AIE87871.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 184.0
  • Bit_score: 268
  • Evalue 6.60e-69
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 183.0
  • Bit_score: 118
  • Evalue 1.90e-24

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGTCAGCCGTAATCGAGAAAACACGGAACGAAGCGTTTGACGAGGACCTCATCCTCGTTGAGCGGCACCTCACCGGAGATGCCGCCGCTTTCGAGTTGATCTACCGCAAATACTATGACAAGGTCTTTGCCATTGCTCGTGGTGTGTTAATGGACGCTGACGAAGCGGCCGACGCGGTTCAAGAAGTCTTCACGCTGGTATACCGCCACATCTCTCGATTTGACCGACGCTCCAAGTTCAGCACCTGGCTCTTCCGTATCGCCGTTAACCGGAGCATTCAGGAGGCCAGAAAGCACCGCCACCGTCATCGAAACGTGGAGCTCACCGAAGCCGCTGGCAAGGAAGCTCCGGTCGAGACTGAGGAAATGGATCCAAGGGTCCAAGCTTCGTTGGCCCAACTGGCTCCGCAGGACCGCGCCCTGCTTACATTGTTCTACTGGGAAGAGCTCAGCCTGAACGAAATCGCCGATAGCATTGGTTGCAACGTGAACGCCGCCAAAACCCGCCTCTATCGAGCCCGCGAGCGATTCCGATCTCATTATGAGGAGGAAATCTCGTGA
PROTEIN sequence
Length: 187
LSAVIEKTRNEAFDEDLILVERHLTGDAAAFELIYRKYYDKVFAIARGVLMDADEAADAVQEVFTLVYRHISRFDRRSKFSTWLFRIAVNRSIQEARKHRHRHRNVELTEAAGKEAPVETEEMDPRVQASLAQLAPQDRALLTLFYWEELSLNEIADSIGCNVNAAKTRLYRARERFRSHYEEEIS*