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SCNpilot_cont_500_bf_scaffold_16255_3

Organism: SCNPILOT_CONT_300_BF_Armatimonadetes_55_34

partial RP 39 / 55 BSCG 34 / 51 MC: 3 ASCG 7 / 38
Location: comp(1379..2770)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 463.0
  • Bit_score: 752
  • Evalue 3.70e-214
Transcription termination factor Rho n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ET73_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 425.0
  • Bit_score: 489
  • Evalue 4.20e-135
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 425.0
  • Bit_score: 489
  • Evalue 1.30e-135

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1392
ATGACGCATCAGTTTCGTCCCAGAAAGTCCGACGGCGGCGGCGGTGGTCGCCGACGTAGCGGCGGTCGTAATCGCGAGGGTCTACCCAAGGCCGACCTCCAGTCCGATCTCGAGGCATTGCCCGAAATCGATTACAACCATTTCGATCAAATGACGCCTGCCGAGCTGCTTAAGGCAGCCAAGGCAGCCAAGCTCGATCCTAAGAGTCTCCTCCGACATGAGCTCATCGAGCTGCTTTTGCAAAAGAAGAATGCCGAATTCGAAGCGATTTACGCCAAAGGCATTCTTGAAGTTCTCAACGATGGTTGGGGCTTCTTGCGAAAGGACAACTATCAACCTTCCTCCGAAGACGTCTATGTAAGCCAATCGCAGGTTAAGCGATTCGGATTGCGCGGAGGCGACACGGTTTTTGGCCAAGTGCGCTTACCGAAAGAAGGTGAGAAGTACAAGGGGATGCTCCGAGTTGAGAGCGTTAACGGATTTGCGACTGGTTCGCCAGAAATGCAGCGCCGAAAGACGTTCGACGAACTCACGCCCCTCTATCCCGACGAAAGGTTGGTCATGGAGACGATGCCGGATAACATTCCGGCCCGAATCGTCGACCTGATCTCTCCGATTGGTAAGGGACAGCGCGCCCTCATCGTTTCGCCGCCCAAGGCCGGTAAGACCACGATGATGAAGACGATTGCCAACGCGATCACTTCTAATCACCCTGAGGTCTATTTGATGGTGCTCCTCGTAGACGAGCGACCAGAAGAAGTTACCGACATGCGTCGAGCGGTGCGTGGTCAGGTGATCTCGTCAACTTTCGACGAGCCTGCCGAGAACCACATGCGAGTTGCTGAGCTTTGTCTTGAGCAAGCGAAGCGACTGGTTGAGACCGGGCGAGACGTGGTTATCGTTCTCGACTCGCTCACTCGTCTTTCGCGAGCTTCTAACCTCACCATCAACCCCAGCGGTCGAACGCTGACGGGTGGTTTGGATCCTTCCGCTCTTTATCGCCCGCGACGATTCTTTGGCGCGGCACGAAATATTGAGGAAGGTGGATCGCTTACGATCATCGCGTCGGTACTTGTCGACACCGGTTCTAAGATGGATGAAGCCATCTTCGAAGAGTTGAAGGGTACGGGTAACAGCGAAATCGTGCTTGATCGAGAATTGGCCGAGCGCCGTATTTGGCCCGCTATCGACATTCGCCGCAGTTCTACTCGCCATGAAGAGTTGCTCTTTAAGAAAGAGGAACTGGAAGGCGTGGTCCAACTTCGCCGCCTAATGGCAAAGGAAAAGGACAGTGTCGAGGCTACCGACAACCTCATCAAACTTCTCAAGCGTACTCCCACGAACGCCTCGTTCTTGGAGACTATCATTCAGCGCGTTAAGGCTACGGTTTAA
PROTEIN sequence
Length: 464
MTHQFRPRKSDGGGGGRRRSGGRNREGLPKADLQSDLEALPEIDYNHFDQMTPAELLKAAKAAKLDPKSLLRHELIELLLQKKNAEFEAIYAKGILEVLNDGWGFLRKDNYQPSSEDVYVSQSQVKRFGLRGGDTVFGQVRLPKEGEKYKGMLRVESVNGFATGSPEMQRRKTFDELTPLYPDERLVMETMPDNIPARIVDLISPIGKGQRALIVSPPKAGKTTMMKTIANAITSNHPEVYLMVLLVDERPEEVTDMRRAVRGQVISSTFDEPAENHMRVAELCLEQAKRLVETGRDVVIVLDSLTRLSRASNLTINPSGRTLTGGLDPSALYRPRRFFGAARNIEEGGSLTIIASVLVDTGSKMDEAIFEELKGTGNSEIVLDRELAERRIWPAIDIRRSSTRHEELLFKKEELEGVVQLRRLMAKEKDSVEATDNLIKLLKRTPTNASFLETIIQRVKATV*