ggKbase home page

SCNpilot_cont_750_bf_scaffold_339_15

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(16597..17250)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T8Y0_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 192.0
  • Bit_score: 141
  • Evalue 1.30e-30
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL24603.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 185.0
  • Bit_score: 142
  • Evalue 8.30e-31
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 175.0
  • Bit_score: 127
  • Evalue 4.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCCTGCCCCCTTCCCCGCCCCGCACCGGCGCGAAAAAGCGCGCGACCGGATCGGCGCCAAAATCATCGTTGCCAAAATCATCGGCAGGCGCCTCGGCCAAGGGCATGGCGCGGCGCGAGGAGATCCTCACCGGTCTGATGAACCGGCTGAGCCGTCAGGAATTGCGCAACCCTTCGCTGCGCGAGATCGGGCGGGCGCTGGGGATCGAACCGGCCCATATCCTCTATTACTTTTCCAGCCGCGAGGAATTGCTGCAACAGGTCATCATCCGCTGGGACGATGATGCCCGCCGCGCGGCGCCCGAAGGAGGCGACACGCTGGACGATTTTGCCCGCCATATCCGGCGCAACATGACCATTCCAGGCATCATGCATCTCTATCTGACCTTTGCCGCCGAAGCGGTGGAGGCGCAGCACCCCGCGCATGATTTCTTTCTGAAACGCTTTGAAGCCGTCTCGGCCAGGCTGGAGCACCATATAAGGCTGGAACAGGCCGAGGGGACCATTCCGGCAAGCGTCAACCCCGCCTCAAGGGCGCGGCAATTGATCGCCTTGTCCGATGGCCTGCAACTGCAATCGCTGGTCGATCCCACGGTCGATGCCTATGGCGAGATGATGGATGCCATCGCGGCCCTGCGCCAAAAATCATGA
PROTEIN sequence
Length: 218
MSLPPSPPRTGAKKRATGSAPKSSLPKSSAGASAKGMARREEILTGLMNRLSRQELRNPSLREIGRALGIEPAHILYYFSSREELLQQVIIRWDDDARRAAPEGGDTLDDFARHIRRNMTIPGIMHLYLTFAAEAVEAQHPAHDFFLKRFEAVSARLEHHIRLEQAEGTIPASVNPASRARQLIALSDGLQLQSLVDPTVDAYGEMMDAIAALRQKS*