ggKbase home page

SCNpilot_cont_750_bf_scaffold_402_23

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38
Location: 22108..23031

Top 3 Functional Annotations

Value Algorithm Source
epimerase n=1 Tax=Rhodococcus opacus RepID=UPI00029CD047 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 287.0
  • Bit_score: 205
  • Evalue 1.00e-49
NAD-dependent epimerase/dehydratase family protein, 3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:ELB92030.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 290.0
  • Bit_score: 203
  • Evalue 4.30e-49
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 317.0
  • Bit_score: 193
  • Evalue 9.90e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGAGCAGTGCAGCGCGGGTCCTACTGACCGGGTCGACGGGATTCGTCGGCTCGGCTGCACTCGCGGCGTTGCGGGAGGCCGGGGTGCCGCTCACCCGCCTGGTGCGCACCGAGACACCGGCCAACAGTGAGGAGCGCATCGTGCTCGGCGACCTTTCGGATCGCCGCGCACTTGTCCGCGCCTGCCGGGAAGCGACCGTGGTCGTTCACAGCGCGAGCTACGTCGGCCCCGACCCAGTTCTTCAACAGCAGGTCAATATCGACGGCACCCGCGCCCTCGTCGAGGTCGCCGGTGCTGCAGGGGTCACCCGCCTCGTGTACCTCAGCACCGCGGGAGTGTATGGATCCACCTGGCCGCCAGGCGCGCGGGAAGGGGACCTACGGCCGAACCCGGGCTCTGACTTGAGTCGCAGCCGGCTGGCCGCCGAGGAGATAGTGCTCGACGCGGACGGGATCGTGGTCCGTCCGAACCTCGTGCATGGGATCGGGGACCGCTGGTTCCTAGCACCGCTGCTGGCCGTCATGCGCCGCCATGAGGCTTGGATCGGAAGTGGTGACACGCTGCTGTCGGCAATCGGACGTATCGAGCTCGGCAAGGTGCTCGCGGCGCTGGCGTGCTCCTCGGCGCCTGCCGGGGTGTACCACGCGGCGGCGTCGAAACCGGCACGACTGCGCGAGCTCGTTGAGCCGATCTACGCGCACGCTGGTCTTGTACCGCCTACTCGACGCCTCACTCCTGAGGATGCGATCACTCAGTTGGCGTTGCAGGGCGTCGCCAAACGACAAGTCACGAAGGTCGCGACCGACAACTGGTTCGACACGACGAAGCTGTGGACCGCCCTCGCCACAAACCTCGTCTCCAGCACTGAAGCCAGCTTCGACAGCGACGCGATTGAGTGGTACGCAACGGCACTGAGTCCCTAG
PROTEIN sequence
Length: 308
VSSAARVLLTGSTGFVGSAALAALREAGVPLTRLVRTETPANSEERIVLGDLSDRRALVRACREATVVVHSASYVGPDPVLQQQVNIDGTRALVEVAGAAGVTRLVYLSTAGVYGSTWPPGAREGDLRPNPGSDLSRSRLAAEEIVLDADGIVVRPNLVHGIGDRWFLAPLLAVMRRHEAWIGSGDTLLSAIGRIELGKVLAALACSSAPAGVYHAAASKPARLRELVEPIYAHAGLVPPTRRLTPEDAITQLALQGVAKRQVTKVATDNWFDTTKLWTALATNLVSSTEASFDSDAIEWYATALSP*