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SCNpilot_cont_750_bf_scaffold_517

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_517_61
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62244..62888)
DNA (645bp) protein (215aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE87C
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEA24900.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_62
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62917..63759)
DNA (843bp) protein (281aa)
enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] rbh
enoyl-CoA hydratase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE87B rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA24899.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_63
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

63826..64182
DNA (357bp) protein (119aa)
paaE; beta-ketoadipyl CoA thiolase (EC:2.3.1.-); K00680 [EC:2.3.1.-]
acetyl-CoA acetyltransferase n=1 Tax=Nocardiopsis prasina RepID=UPI000349CADC
Beta-ketoadipyl-CoA thiolase {ECO:0000313|EMBL:EJI99138.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
SCNpilot_cont_750_bf_scaffold_517_64
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

64526..65074
DNA (549bp) protein (183aa)
Beta-ketoadipyl-CoA thiolase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q1E5_STRC2
Beta-ketoadipyl-CoA thiolase {ECO:0000313|EMBL:EFG10571.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
beta-ketoadipyl CoA thiolase
SCNpilot_cont_750_bf_scaffold_517_65
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65114..67186
DNA (2073bp) protein (691aa)
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:AEA24898.1}; EC=1.2.1.3 {ECO:0000313|EMBL:AEA24898.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
phenylacetic acid degradation protein paaN; K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7] rbh
enoyl-CoA hydratase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE87A rbh
SCNpilot_cont_750_bf_scaffold_517_66
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67192..68532
DNA (1341bp) protein (447aa)
phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
phenylacetate-CoA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE879 rbh
SCNpilot_cont_750_bf_scaffold_517_67
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68644..69609)
DNA (966bp) protein (322aa)
Ribonuclease BN n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSU4_PSEUX rbh
ribonuclease BN; K07058 membrane protein rbh
Ribonuclease BN {ECO:0000313|EMBL:AEA24547.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_68
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69753..70607
DNA (855bp) protein (285aa)
gluconolactonase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625609 rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:AIJ22690.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
IclR family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_517_69
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70742..71935
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JY64_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31071.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_750_bf_scaffold_517_70
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71952..73166)
DNA (1215bp) protein (405aa)
ROK family transcriptional regulator n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WVL2_9ACTO rbh
Transcriptional regulator, ROK family protein {ECO:0000313|EMBL:EWC58775.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ROK domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_517_71
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73242..74765
DNA (1524bp) protein (508aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7B1_CELFA rbh
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:EWC58776.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
SCNpilot_cont_750_bf_scaffold_517_72
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74758..75789
DNA (1032bp) protein (344aa)
Ribose ABC transporter (Permease) n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYX0_STRRD rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:EWC58777.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ribose ABC transporter permease; K10440 ribose transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_517_73
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75818..76864
DNA (1047bp) protein (349aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037B2F33 rbh
Ribose ABC transporter, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:EWC58778.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_517_74
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76861..78030
DNA (1170bp) protein (390aa)
Oxidoreductase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7A8_CELFA
Oxidoreductase {ECO:0000313|EMBL:EWC58779.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
oxidoreductase domain-containing protein
SCNpilot_cont_750_bf_scaffold_517_75
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78030..79037
DNA (1008bp) protein (336aa)
Inosose isomerase {ECO:0000313|EMBL:EWC58780.1}; EC=5.3.99.- {ECO:0000313|EMBL:EWC58780.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Putative sugar phosphate isomerase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUV0_BLASD rbh
putative sugar phosphate isomerase rbh
SCNpilot_cont_750_bf_scaffold_517_76
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79056..79283
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TA80_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM07782.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
SCNpilot_cont_750_bf_scaffold_517_77
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79483..80193)
DNA (711bp) protein (237aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ9_PSEUX
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AEA24619.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_78
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80198..81067)
DNA (870bp) protein (290aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0S5_PSEUX rbh
Rieske (2Fe-2S) domain-containing protein rbh
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA25777.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_79
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81285..81575)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS39_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ38486.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_750_bf_scaffold_517_80
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81572..82018)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S0S4_MICSL
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:EWM64532.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
SCNpilot_cont_750_bf_scaffold_517_81
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82048..82371)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6RA13_NOCCG
Membrane protein {ECO:0000313|EMBL:EYU71047.1}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_517_82
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82406..82687)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24618.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_517_83
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82727..83014)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B662E
Uncharacterized protein {ECO:0000313|EMBL:EYR64593.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_517_84
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83042..83614
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0M5_9ACTO
Glyoxalase {ECO:0000313|EMBL:KGI66426.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
glyoxalase
SCNpilot_cont_750_bf_scaffold_517_85
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83620..84258
DNA (639bp) protein (213aa)
Carboxymuconolactone decarboxylase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MHI6_9ACTO rbh
Transposase {ECO:0000313|EMBL:EME20445.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
transposase rbh
SCNpilot_cont_750_bf_scaffold_517_86
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84380..84520)
DNA (141bp) protein (47aa)
cytochrome P450 n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376064D
cyp49; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI12849.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
Displaying items 61-86 of 86 in total

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