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SCNpilot_cont_750_bf_scaffold_712

Search features with annotation key words

Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_712_31
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19917..20690)
DNA (774bp) protein (258aa)
4-oxalocrotonate decarboxylase; K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77] rbh
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:AEA26454.1}; EC=4.1.1.77 {ECO:0000313|EMBL:AEA26454.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
4-oxalocrotonate decarboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW40_PSEUX rbh
SCNpilot_cont_750_bf_scaffold_712_32
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20687..21496)
DNA (810bp) protein (270aa)
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:AEA26455.1}; EC=4.2.1.80 {ECO:0000313|EMBL:AEA26455.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
2-oxopent-4-enoate hydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW41_PSEUX rbh
2-oxopent-4-enoate hydratase rbh
SCNpilot_cont_750_bf_scaffold_712_33
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21563..21766)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW42_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26456.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_712_34
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(22072..22758)
DNA (687bp) protein (229aa)
cyclase n=1 Tax=Paenibacillus sp. HW567 RepID=UPI0003813AEB
cyclase
Tax=RBG_13_Bathyarchaeota_38_9_curated
SCNpilot_cont_750_bf_scaffold_712_35
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22769..23539)
DNA (771bp) protein (257aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24659.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24659.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX28_PSEUX rbh
3-oxoacyl-ACP reductase rbh
SCNpilot_cont_750_bf_scaffold_712_36
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23580..26030)
DNA (2451bp) protein (817aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C785_SPHTD rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ACZ39731.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_750_bf_scaffold_712_37
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26027..26530)
DNA (504bp) protein (168aa)
carbon-monoxide dehydrogenase; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA24465.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA24465.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPG7_PSEUX
SCNpilot_cont_750_bf_scaffold_712_38
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26536..27405)
DNA (870bp) protein (290aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA24764.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA24764.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ60_PSEUX
SCNpilot_cont_750_bf_scaffold_712_39
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27501..29300)
DNA (1800bp) protein (600aa)
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AFP40407.1}; EC=5.3.1.23 {ECO:0000313|EMBL:AFP40407.1};; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
Transcriptional regulator, CdaR n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7G4A3_MYCS2 rbh
GAF domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_712_40
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29408..30445)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE20A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25792.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_712_41
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30442..31221)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3N1_9ACTO
GntR family transcriptional regulator {ECO:0000313|EMBL:KDN73502.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_712_42
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31218..32393)
DNA (1176bp) protein (392aa)
monooxygenase FAD-binding protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036A772A rbh
Putative salicylate hydroxylase {ECO:0000313|EMBL:CDO19881.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
Monooxygenase, FAD-binding rbh
SCNpilot_cont_750_bf_scaffold_712_43

Not on your lists

comp(32414..32935)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037B7A61
Uncharacterized protein {ECO:0000313|EMBL:KGA13403.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
SCNpilot_cont_750_bf_scaffold_712_44
Saccharopolyspora spinosa, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33082..34674
DNA (1593bp) protein (531aa)
acetolactate synthase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase n=1 Tax=Saccharopolyspora spinosa RepID=Q6JHM8_9PSEU rbh
Acetolactate synthase {ECO:0000313|EMBL:AAS00429.1}; TaxID=60894 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora spinosa.;"
SCNpilot_cont_750_bf_scaffold_712_45
unknown

Not on your lists

34716..34883
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_712_46
Mycobacterium sp. MAC_080597_8934, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35024..35773)
DNA (750bp) protein (250aa)
Transposase IS4 family protein n=5 Tax=Mycobacterium avium RepID=T2GSA2_MYCAV
Transposase DDE domain protein {ECO:0000313|EMBL:ETZ66712.1}; TaxID=1335322 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium sp. MAC_080597_8934.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_712_47
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35819..36220)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003603C98
PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ACZ83642.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_712_48
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36505..36771)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26499.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_712_49
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36843..37370)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26500.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 31-49 of 49 in total

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