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SCNpilot_cont_750_bf_scaffold_351_6

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5484..7175)

Top 3 Functional Annotations

Value Algorithm Source
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX15_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 559.0
  • Bit_score: 594
  • Evalue 8.60e-167
  • rbh
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 559.0
  • Bit_score: 594
  • Evalue 2.70e-167
  • rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA24646.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 559.0
  • Bit_score: 594
  • Evalue 1.20e-166

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1692
ATGGGTGACGTTCTCGCACGGCGCAGGCTCCTCACCTCTGCCCTGGCCCGGCTCCTGGACCGCCCGGATGCCGACCTGCCCGGGATCCCGCACCACGTGGCCGCGTCCTGGCGCCGGAGCCTCGCCGGCGGCGTCGATCCCGGGATGATCGTCAACCGCTACCACCCGGACCTCGACGTCGACTCCCGCCTGGTGCGCTGCGCCCGTCCGGTGATCGAGGAGCTGGCCGAGCAGACGGCGGGCATCCCGGTGTGCGTCGTGCTCACCGACGACCGCGCCCGTCTGCTGGTCCGGCTGGACACGACGGCCGAGATCGGGCGGGCCGCGGACGACAACCACTTCGCCCAGGGGTTCGGCTACGCCGAGGGCGCCGTCGGCACCAACGGGGTGGGCACCGTCCTGGAGTCCGGCCGGTCCGTCCACGTCGTGGGCGCCGAGCACTTCGTCGAGCCCCTGCAGTCCTACGCCTGCGCCGGGGCGCCGGTGCGCGACCCGTTCACCGGACGGATCGACGGCGTGCTCGACGTCAGCTGCCGGGCCGAGCACTCGTCGCCGATCCTGCATTCGCTGGTCGCGTCGGCGGCGGCCCGCATCCAGCACGCCCTGCTGCACGACCGCGACCTGGGCCAGCAGGCGGTGTTCGACCTCTACACCCGGGTCGACGTCCGGTCCCGGGGAGCGGTGCTGGCCGTGGGCCGGCGGATGGTGCTGGCCAACACCGTGCTGCAGACGCTGCTGGACCCGGGCGATCTCGCCGCCCTCGAGGACCACGCCCGGTTCCGCATGCTGCGCGGGCCCGACGTCGACGACCGCCTGGACCTGCCGTCGGGGGTCCGGGTCCGGATGCGGGGCACCACGGTCGCCGCCGGCAGCAGGGTCGCCGGGCTGGTCGTGGTGATCTCGGTGGTGCGGGAGGCCTGCGGGGCGGCGTTGTCCCGCGGCGCGTCGCCGGCGCCGAGCTCCAGCCCGGCCTGGCGCGGGGCGTGGGACGCGGCGGCCGACGCGCTCCGGGCCAGGACGCCGCTGCTGGTCGTCGGGGAGCCCGGGAGCGGCCGACGCCGGCTGCTCACCGACCTGGACCGGGCGTTGCACGGCCCCGGGCTGGTGGTCGAGATCGGGCCCGACTGCGCCGATCCCGTGGCGCGCGTCCAGGGTGCCGGACCCCTGTCGCTGATCGTGCTGACCGACGTCGAGCGGTGGGACGGCGTCCCGCCCGGCCTGCGCGCCTCCCGGGCCCGGCTGGCTGCGACGGCCACGGACCGTTCGGTGTGCGATCCGGAGCTGCTCACCCGGTTCCGGCGCACCGTGACGGTGCCGCCGCTGCGGAACCGGACGGCCGACCTGCCGGGGCTGGTGACCGACCTGCTGGCCGGGCGCGACGCGCGCCTGTCCGCGGAGGCCCTGCGCACCCTGGCCCGCCACACGTGGCCGGGCAACGTCCAGGAGCTGAAGGACGCGCTGGACACGGCGCTGCGCCGGCGTCCGACGGGGGTGGTGGAGGTCGGTGACCTGCCCGCGTCCTGCCAGAGCACGCCGCGGAGCGCCCTGCGCCCGGTCGACCAGGCCGAGCGCGACGCGATCGTGGTGGCCCTGCGGGAGTCGGACGGGAACCGGGCGGCGGCCGCCGCGGCGCTGGGGGTGGCCCGCTCCACCCTCTACCGCAAGATCGCGCACTACGGCATCACGGCCTGA
PROTEIN sequence
Length: 564
MGDVLARRRLLTSALARLLDRPDADLPGIPHHVAASWRRSLAGGVDPGMIVNRYHPDLDVDSRLVRCARPVIEELAEQTAGIPVCVVLTDDRARLLVRLDTTAEIGRAADDNHFAQGFGYAEGAVGTNGVGTVLESGRSVHVVGAEHFVEPLQSYACAGAPVRDPFTGRIDGVLDVSCRAEHSSPILHSLVASAAARIQHALLHDRDLGQQAVFDLYTRVDVRSRGAVLAVGRRMVLANTVLQTLLDPGDLAALEDHARFRMLRGPDVDDRLDLPSGVRVRMRGTTVAAGSRVAGLVVVISVVREACGAALSRGASPAPSSSPAWRGAWDAAADALRARTPLLVVGEPGSGRRRLLTDLDRALHGPGLVVEIGPDCADPVARVQGAGPLSLIVLTDVERWDGVPPGLRASRARLAATATDRSVCDPELLTRFRRTVTVPPLRNRTADLPGLVTDLLAGRDARLSAEALRTLARHTWPGNVQELKDALDTALRRRPTGVVEVGDLPASCQSTPRSALRPVDQAERDAIVVALRESDGNRAAAAAALGVARSTLYRKIAHYGITA*