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SCNpilot_cont_750_bf_scaffold_529_5

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(4832..5800)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 317.0
  • Bit_score: 399
  • Evalue 1.20e-108
  • rbh
DNA ligase D n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 317.0
  • Bit_score: 399
  • Evalue 4.00e-108
  • rbh
DNA ligase D {ECO:0000313|EMBL:AEA27127.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 317.0
  • Bit_score: 399
  • Evalue 5.60e-108

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGAAACCCTGATGCCTGGCTCGGTGCGGCCGATGCTTGCCGTCGGCGGCTCGCCGCCGGTGGGGGAGGGGTGGGCGGTGGAGTTCAAGTGGGACGGGGTGCGGGCGATCGTGGCCGCGGCGGGGGACCGGGTGCGGATCACCAGCCGTAACGGCAACGACGTGTCCGGCGGCTATCCCGAGATCGTCGCCGCCGGGCTGGGCGAGGGTCGGTCGGTGGTGCTCGACGGCGAGCTCGTCGCCCTCGACGCCGCGGGGCGTCCGGACTTCGGGCTGCTGCAGCAGCGGATGCACGTGCGCGCCCCGGGTCCGGAGCTGCGCGCGGTGGCGGTGTCGTTCTCCGTCTTCGACGTTCTGGAGCTCGACGGCCGCTCGCTGCTGCGGGAGACCTACGACGTGCGCCGCGAGGTGCTGCGTGGACTCGGTCTGGACGGCCTGGCGGGGGTGTCGGTGCCGCCGTCGTTCACCGATCTCCCGGCCGTGCAGTTGCTGGAGGTGGCGCGGGAGCACCGGCTGGAGGGGGTGGTGGCGAAGCGCCGGGCGTCGCGCTACGAGCCGGGGCGGCGGTCGCCGTCGTGGACGAAGACCGCGCTGATCTCCACGCAGGAGGTCGTGATCGGCGGCTGGACGGTGGGGGCGGGCCGCCGTGCGGGCACGCTGGGTGCTTTGCTGCTGGGGGCCCGCGACGTGGCCGGTCGGTTGCGGTATCTGGGCAACGTGGGTACCGGGTTCACCGAGGCTGCGCTGCGGGATCTTCTGGTGCGGCTCGGTCCGCTGCACACGTCGCGGAGCCCGTTCGACGACGAGGTGCCGCGGGAGCTCACGCGCGGCGTGACGTGGGTGGCTCCGCAGCTGGTAGGCGAGGTCGTCTACCGCACCCTCACCGGCGACCAGCGGCTGCGCCACGCCGCGTGGCGTGGGCTGCGGCCCGACCGCGACCCGGACGAGGTCGTGATCGAACTGCCCTAG
PROTEIN sequence
Length: 323
METLMPGSVRPMLAVGGSPPVGEGWAVEFKWDGVRAIVAAAGDRVRITSRNGNDVSGGYPEIVAAGLGEGRSVVLDGELVALDAAGRPDFGLLQQRMHVRAPGPELRAVAVSFSVFDVLELDGRSLLRETYDVRREVLRGLGLDGLAGVSVPPSFTDLPAVQLLEVAREHRLEGVVAKRRASRYEPGRRSPSWTKTALISTQEVVIGGWTVGAGRRAGTLGALLLGARDVAGRLRYLGNVGTGFTEAALRDLLVRLGPLHTSRSPFDDEVPRELTRGVTWVAPQLVGEVVYRTLTGDQRLRHAAWRGLRPDRDPDEVVIELP*