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SCNpilot_cont_750_bf_scaffold_529_35

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 28698..29603

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXG9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 295.0
  • Bit_score: 201
  • Evalue 1.10e-48
Membrane protein {ECO:0000313|EMBL:EWT06790.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 307.0
  • Bit_score: 207
  • Evalue 2.90e-50
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 298.0
  • Bit_score: 199
  • Evalue 1.80e-48

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGACGTGGCCGGCCTGGTTGGCCGCTGTTGCCGGCGGCGCTTTCGCTCTCGGTCCCCTGCTCATCGTGGCGGGGCTGCGCCGGGCCTCGGACGCCCCCGCCGTGGTTCGACCACCGGTGACGTGGCGACGCCGCTTGGCGGCGCTGCAGCGGTCGGCCCGTGTCGATGGTGCCGGCCGGTCGGGCCACCGCAGACGGACCGCCGCATGGATGTCGGCCGGCCTCGCCTTATGGATCGTCACCGGTTGGCCGGCCGCCGGCATCGCGGTGTCCGTGGTCGGGGTGTGGATGCCCTGGCTGCTCGGCTCGGCACGCGTCGCCCAACAGCAGATCGACCGGCTCGAGTCGCTGGAGTCCTGGTGCCGGCGGATGGCCGACACGCTGGCCGGCGGTGGCGCGATCGGCCTCACCCAGGCGGTGAACGCGACCGTCGAGACGGCCGACGACCTCGTCGCCGCGCCGGTGGCCGCGCTGGCCCGCCGGCTCCGGACCGGGACGGATCCGGCGTCCGCGGTCAGGTCGTTCGCCGATGCGATCGACGACCGCGTCGGCGACACGGTGGCCGCGGCGCTGCTGCTCGCCCTGCACCAGCAGAGCAACGGCATCGCCCGGGTGCTGCGACAGCTGGCCGAGGGCGTCGCCCGTGACGTCCGTGCCCGGCGCGACATCGAAGCGGAGCGCGCGGAGTCGCGGCAGTCCATCCGGATGCTCCTGATCATCCAAGCTGGGGTGCTGGTGCTCCTCGCCCTCGTACCCGGGTTCGCGGCACCGTACGGGACGCCAGTGGGCCAGATCGTCATGGCGGTTCTGCTCTCCGGGACGATCGCGCTGATGGTCTGGATGCGCCGGTTGGCCCTGGGCCGCCGCTCCCCACGGTTCCTCGTCGCCAAGCCGGAGCCGACATGA
PROTEIN sequence
Length: 302
VTWPAWLAAVAGGAFALGPLLIVAGLRRASDAPAVVRPPVTWRRRLAALQRSARVDGAGRSGHRRRTAAWMSAGLALWIVTGWPAAGIAVSVVGVWMPWLLGSARVAQQQIDRLESLESWCRRMADTLAGGGAIGLTQAVNATVETADDLVAAPVAALARRLRTGTDPASAVRSFADAIDDRVGDTVAAALLLALHQQSNGIARVLRQLAEGVARDVRARRDIEAERAESRQSIRMLLIIQAGVLVLLALVPGFAAPYGTPVGQIVMAVLLSGTIALMVWMRRLALGRRSPRFLVAKPEPT*