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SCNpilot_cont_750_bf_scaffold_604_23

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(20224..20547)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q9H6_STANL similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 81.0
  • Bit_score: 109
  • Evalue 2.10e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 81.0
  • Bit_score: 109
  • Evalue 6.60e-22
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 81.0
  • Bit_score: 109
  • Evalue 2.90e-21

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Taxonomy

Stackebrandtia nassauensis → Stackebrandtia → Glycomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGATCCAGCCCGCACGGGCGCGGTCCGGCGACGTCGCCCGGTTGCACTGCGAGGTGACCTACTGGTGCCTCAACGGCCATCACACGACGCGGTCCTGGTCCGGCGCCGCCGAGGTCCCCACCACATGGGAGTGCCGGCACTGCGGCCTCCCGGCCGGGCGGGACCGGACCCACCCACCCCAACCCGTCCGAACACGGCCCTTCAAGAGCCCGCTCGCCCACCTCATGGAAAGACGCACCGAAGCCGAGTGCGACGCGCTGCTGGACGGGGCGCTGGCGAACCTGCGCGCGCGCCGCCACCGCAGAGGTCGGCAGCGATCATGA
PROTEIN sequence
Length: 108
MIQPARARSGDVARLHCEVTYWCLNGHHTTRSWSGAAEVPTTWECRHCGLPAGRDRTHPPQPVRTRPFKSPLAHLMERRTEAECDALLDGALANLRARRHRRGRQRS*