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SCNpilot_cont_750_bf_scaffold_1018_5

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 5445..6497

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH16_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 349.0
  • Bit_score: 382
  • Evalue 4.20e-103
  • rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCH80000.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 349.0
  • Bit_score: 403
  • Evalue 3.20e-109
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 349.0
  • Bit_score: 382
  • Evalue 1.30e-103
  • rbh

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGCAGGACGACGTGCAGCCGGTCAGGTCCGGGCGCCCGCGGCACGCCAGCATCATCGACGTGGCGACGCTCGCCGGGGTCTCGCCGGCCACCGTCTCCCGGTCGCTGCGCGGGCACCACAACGTCTCGCCGGCCACCCGTCAGCGGGTGCTCGAGGCCGCCGAGGAGCTGTCCTACAGCGCGTCGCCCCAGGCCTCCGGTCTGGCGTCGGGGCGCACGCGCACCATCGGCCTCGTCGTCCCGTTCGTCACGCGGTGGTTCTTCGCCAACGCCGTGGCGGGCGCCTACCAGGTGCTCGCCGACGCCGGCTACGACGTGCTGCTCTACCACCTCGGCAGCGCCGCCACCCGCGACCGCTTCTTCGAGCGGATGCCGCTGACCCGCCGCGTCGACGCGGTGGTCACGCTCGCGCTGCCGCTCGACGAGGAGCACACGCTAGCCCTGCGGGCGCTCGACATGCCGCTGGTGACGCTGGGTGCGCAGATCCCGGGGGTGTCGTCGGTGCGCATCGACGACGCGGCGGCCGTGCGGCTCGCCGTCTACCACCTGGTCCACCAGGGCCACGAGGACATCGCGATGATCTCGGGCGACCAGGACGACCTGGGGTTCGGCTTCCTGTCGTCGCAGGACCGCTGCGAGGGGTTCCGGCAGGCGATGGCGTCGGCCGGGCTGCGCGCCCGCGAGGAGCTCATGGTGTCGGGCGAGTACGGCATCGAGGGCGGGGCCCGGGCGATGACGGCGCTGATGGCCGGTCCGACCCTGCCCACCGCCGTGTTCGCCGAGTACGACGAGCTGGCGATCGGCGCGCTGCGCACGTTGCGGCGTGCCAGCATCCCGGTGCCCGGGCGCGTCTCGGTGGTGGGGATGGACGACCACGAGATGGCCTCGGTCGTCGACCTCACGACCGTGGCCCAGCCGGTGCTCGAGCAGGGGGGTACCGCCGCCCGGCTGCTGCTGGAGGTGCTCGACCGGGGGGAGACCGAGGTCGTCGACGTCGTGGTGCCCACCCGGCTGGTGGTGCGGGGCACGACGGCCGCACCTCATCCGAACTGA
PROTEIN sequence
Length: 351
MQDDVQPVRSGRPRHASIIDVATLAGVSPATVSRSLRGHHNVSPATRQRVLEAAEELSYSASPQASGLASGRTRTIGLVVPFVTRWFFANAVAGAYQVLADAGYDVLLYHLGSAATRDRFFERMPLTRRVDAVVTLALPLDEEHTLALRALDMPLVTLGAQIPGVSSVRIDDAAAVRLAVYHLVHQGHEDIAMISGDQDDLGFGFLSSQDRCEGFRQAMASAGLRAREELMVSGEYGIEGGARAMTALMAGPTLPTAVFAEYDELAIGALRTLRRASIPVPGRVSVVGMDDHEMASVVDLTTVAQPVLEQGGTAARLLLEVLDRGETEVVDVVVPTRLVVRGTTAAPHPN*