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SCNpilot_cont_750_bf_scaffold_560

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_560_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1153)
DNA (1152bp) protein (384aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8P8_9GAMM
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:EIL95839.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
SCNpilot_cont_750_bf_scaffold_560_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1364..1777)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8P9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95840.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_560_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1941..3125)
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL6_9GAMM rbh
acetyl-CoA acetyltransferase rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGG89649.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_560_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3353..6208
DNA (2856bp) protein (952aa)
Autotransporter serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WPP0_9GAMM rbh
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:AGG89648.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
autotransporter-associated beta strand repeat protein rbh
SCNpilot_cont_750_bf_scaffold_560_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6368..7183)
DNA (816bp) protein (272aa)
DeoR family regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z2_9GAMM rbh
DeoR family regulatory protein {ECO:0000313|EMBL:EIL94183.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DeoR family regulatory protein; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
SCNpilot_cont_750_bf_scaffold_560_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..8397)
DNA (1218bp) protein (406aa)
Amidohydrolase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z1_9GAMM rbh
Amidohydrolase 2 {ECO:0000313|EMBL:EIL94182.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amidohydrolase 2 rbh
SCNpilot_cont_750_bf_scaffold_560_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8573..9490)
DNA (918bp) protein (306aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
fructose-bisphosphate aldolase n=1 Tax=Dyella japonica RepID=UPI000371A768 rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AHX14161.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_560_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9517..10788
DNA (1272bp) protein (424aa)
putative tagatose-6-phosphate aldose/ketose isomerase (EC:5.-.-.-); K02082 tagatose-6-phosphate ketose/aldose isomerase [EC:5.-.-.-]
Tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y9_9GAMM rbh
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EIL94180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_bf_scaffold_560_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10785..11711
DNA (927bp) protein (309aa)
Putative carbohydrate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y8_9GAMM rbh
Putative carbohydrate kinase {ECO:0000313|EMBL:EIL94179.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative carbohydrate kinase
SCNpilot_cont_750_bf_scaffold_560_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11708..12640
DNA (933bp) protein (311aa)
lacC; putative tagatose-6-phosphate kinase (EC:2.7.1.144); K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
Phosphofructokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y7_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_560_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12770..15805
DNA (3036bp) protein (1012aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2M4_FRAAD rbh
Oar protein {ECO:0000313|EMBL:AHX13141.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor for ferrienterochelin and colicins rbh
SCNpilot_cont_750_bf_scaffold_560_12
unknown

Not on your lists

16084..16362
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003614A3F
SCNpilot_cont_750_bf_scaffold_560_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16600..18663
DNA (2064bp) protein (688aa)
Enterotoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y4_9GAMM rbh
Enterotoxin {ECO:0000313|EMBL:EIL94175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enterotoxin rbh
SCNpilot_cont_750_bf_scaffold_560_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18666..20126
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ94_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX14156.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_560_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20186..21928
DNA (1743bp) protein (581aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51] rbh
Alpha-L-fucosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB6_9GAMM rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:EIL97457.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_560_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22170..24032
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003693942 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH94512.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_560_17
unknown

Not on your lists

comp(24007..24120)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_560_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24117..25295)
DNA (1179bp) protein (393aa)
Glycosyl hydrolase family 88 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1W3_GRAMM rbh
glycosyl hydrolase family protein rbh
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AEU37015.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_bf_scaffold_560_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

25411..26625
DNA (1215bp) protein (405aa)
Putative lipoprotein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UJW7_TANFA
putative lipoprotein
Tax=RBG_13_Acidobacteria_68_16_curated
SCNpilot_cont_750_bf_scaffold_560_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26648..28510
DNA (1863bp) protein (621aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Beta-galactosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB7_9GAMM rbh
beta-galactosidase rbh
SCNpilot_cont_750_bf_scaffold_560_21
unknown

Not on your lists

comp(28569..28838)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_560_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28917..30074)
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase (EC:1.3.8.4) rbh
isovaleryl-CoA dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI0003453A5C rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_560_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30332..30799)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNT6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88877.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
3-hydroxylacyl-(acyl carrier protein) dehydratase
SCNpilot_cont_750_bf_scaffold_560_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30796..31155)
DNA (360bp) protein (120aa)
Acyl-CoA synthetase, AMP-(Fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHF5_9GAMM
Acyl-CoA synthetase, AMP-(Fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase {ECO:0000313|EMBL:EIL98896.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AMP-binding protein
SCNpilot_cont_750_bf_scaffold_560_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31152..31694)
DNA (543bp) protein (181aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C2FD4
Uncharacterized protein {ECO:0000313|EMBL:EIL98895.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_560_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31913..34297)
DNA (2385bp) protein (795aa)
Putative lipoprotein transmembrane n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHE9_9GAMM rbh
Putative lipoprotein transmembrane {ECO:0000313|EMBL:EIL98890.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lipoprotein transmembrane rbh
SCNpilot_cont_750_bf_scaffold_560_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34294..34905)
DNA (612bp) protein (204aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHE8_9GAMM
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_cont_750_bf_scaffold_560_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35024..36127)
DNA (1104bp) protein (368aa)
Glutamate dehydrogenase/leucine dehydrogenase n=2 Tax=Rhodanobacter RepID=I4WPN7_9GAMM rbh
glutamate dehydrogenase/leucine dehydrogenase rbh
Glutamate dehydrogenase/leucine dehydrogenase {ECO:0000313|EMBL:AGG89645.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_560_29
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36677..37018
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036070FB
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KJV30300.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_560_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37023..38633)
DNA (1611bp) protein (537aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM75_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying items 1-30 of 44 in total

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